Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Polr2aP08775 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Polr2aP08775 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.9■□□□□ 0.14
Polr2aP08775 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Polr2aP08775 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Polr2aP08775 Gm5687-201ENSMUST00000118252 640 ntBASIC15.89■□□□□ 0.13
Polr2aP08775 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC15.89■□□□□ 0.13
Polr2aP08775 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Polr2aP08775 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.89■□□□□ 0.13
Polr2aP08775 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Polr2aP08775 Rps4l-202ENSMUST00000204242 789 ntBASIC15.89■□□□□ 0.13
Polr2aP08775 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Polr2aP08775 Gm5363-201ENSMUST00000211927 938 ntBASIC15.89■□□□□ 0.13
Polr2aP08775 Gm7046-201ENSMUST00000221351 977 ntBASIC15.89■□□□□ 0.13
Polr2aP08775 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Polr2aP08775 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Polr2aP08775 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Polr2aP08775 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Polr2aP08775 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Polr2aP08775 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Polr2aP08775 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Polr2aP08775 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Polr2aP08775 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Polr2aP08775 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Polr2aP08775 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Polr2aP08775 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.89■□□□□ 0.13
Polr2aP08775 Gm37922-201ENSMUST00000195596 455 ntBASIC15.89■□□□□ 0.13
Polr2aP08775 Gm24447-201ENSMUST00000083977 338 ntBASIC15.89■□□□□ 0.13
Polr2aP08775 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Polr2aP08775 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.89■□□□□ 0.13
Polr2aP08775 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Polr2aP08775 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Polr2aP08775 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Polr2aP08775 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Polr2aP08775 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Polr2aP08775 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Polr2aP08775 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Polr2aP08775 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Polr2aP08775 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Polr2aP08775 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Polr2aP08775 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Polr2aP08775 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Polr2aP08775 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Polr2aP08775 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC15.88■□□□□ 0.13
Polr2aP08775 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.88■□□□□ 0.13
Polr2aP08775 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.88■□□□□ 0.13
Polr2aP08775 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Polr2aP08775 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Polr2aP08775 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Polr2aP08775 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Polr2aP08775 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Polr2aP08775 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Polr2aP08775 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Polr2aP08775 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.88■□□□□ 0.13
Polr2aP08775 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Polr2aP08775 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Polr2aP08775 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
Polr2aP08775 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Polr2aP08775 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.87■□□□□ 0.13
Polr2aP08775 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC15.87■□□□□ 0.13
Polr2aP08775 Gm10608-202ENSMUST00000213924 676 ntBASIC15.87■□□□□ 0.13
Polr2aP08775 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Polr2aP08775 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.87■□□□□ 0.13
Polr2aP08775 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
Polr2aP08775 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Polr2aP08775 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.87■□□□□ 0.13
Polr2aP08775 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.87■□□□□ 0.13
Polr2aP08775 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.87■□□□□ 0.13
Polr2aP08775 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Polr2aP08775 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Polr2aP08775 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC15.87■□□□□ 0.13
Polr2aP08775 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Polr2aP08775 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC15.87■□□□□ 0.13
Polr2aP08775 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC15.87■□□□□ 0.13
Polr2aP08775 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.87■□□□□ 0.13
Polr2aP08775 Gm26315-201ENSMUST00000083890 321 ntBASIC15.87■□□□□ 0.13
Polr2aP08775 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Polr2aP08775 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Polr2aP08775 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Polr2aP08775 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Polr2aP08775 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Polr2aP08775 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Polr2aP08775 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Polr2aP08775 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Polr2aP08775 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Polr2aP08775 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Polr2aP08775 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.86■□□□□ 0.13
Polr2aP08775 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC15.86■□□□□ 0.13
Polr2aP08775 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC15.86■□□□□ 0.13
Polr2aP08775 AC122371.3-201ENSMUST00000223402 1061 ntBASIC15.86■□□□□ 0.13
Polr2aP08775 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Polr2aP08775 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Polr2aP08775 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Polr2aP08775 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Polr2aP08775 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Polr2aP08775 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Polr2aP08775 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC15.86■□□□□ 0.13
Polr2aP08775 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Polr2aP08775 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Polr2aP08775 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms