Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ApoeP08226 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ApoeP08226 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.44□□□□□ -0.26
ApoeP08226 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
ApoeP08226 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ApoeP08226 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ApoeP08226 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ApoeP08226 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ApoeP08226 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ApoeP08226 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ApoeP08226 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ApoeP08226 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
ApoeP08226 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ApoeP08226 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ApoeP08226 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
ApoeP08226 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ApoeP08226 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ApoeP08226 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ApoeP08226 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
ApoeP08226 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ApoeP08226 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ApoeP08226 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
ApoeP08226 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
ApoeP08226 Gm15173-201ENSMUST00000122049 433 ntBASIC13.43□□□□□ -0.26
ApoeP08226 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.43□□□□□ -0.26
ApoeP08226 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ApoeP08226 Gm10275-202ENSMUST00000168697 495 ntBASIC13.43□□□□□ -0.26
ApoeP08226 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
ApoeP08226 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.43□□□□□ -0.26
ApoeP08226 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
ApoeP08226 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.43□□□□□ -0.26
ApoeP08226 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ApoeP08226 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ApoeP08226 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ApoeP08226 Gm10275-201ENSMUST00000092620 635 ntBASIC13.43□□□□□ -0.26
ApoeP08226 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ApoeP08226 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ApoeP08226 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ApoeP08226 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ApoeP08226 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ApoeP08226 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ApoeP08226 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
ApoeP08226 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
ApoeP08226 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ApoeP08226 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ApoeP08226 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ApoeP08226 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.42□□□□□ -0.26
ApoeP08226 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ApoeP08226 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ApoeP08226 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ApoeP08226 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ApoeP08226 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ApoeP08226 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.42□□□□□ -0.26
ApoeP08226 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ApoeP08226 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ApoeP08226 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
ApoeP08226 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.42□□□□□ -0.26
ApoeP08226 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ApoeP08226 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
ApoeP08226 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ApoeP08226 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.42□□□□□ -0.26
ApoeP08226 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.42□□□□□ -0.26
ApoeP08226 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ApoeP08226 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ApoeP08226 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.42□□□□□ -0.26
ApoeP08226 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.42□□□□□ -0.26
ApoeP08226 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.42□□□□□ -0.26
ApoeP08226 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.42□□□□□ -0.26
ApoeP08226 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ApoeP08226 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
ApoeP08226 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ApoeP08226 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
ApoeP08226 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ApoeP08226 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
ApoeP08226 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ApoeP08226 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ApoeP08226 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ApoeP08226 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.41□□□□□ -0.26
ApoeP08226 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ApoeP08226 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ApoeP08226 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ApoeP08226 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ApoeP08226 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ApoeP08226 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ApoeP08226 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ApoeP08226 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ApoeP08226 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.41□□□□□ -0.26
ApoeP08226 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ApoeP08226 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ApoeP08226 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ApoeP08226 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
ApoeP08226 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
ApoeP08226 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.41□□□□□ -0.26
ApoeP08226 Gm25925-201ENSMUST00000158314 306 ntBASIC13.41□□□□□ -0.26
ApoeP08226 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ApoeP08226 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.41□□□□□ -0.26
ApoeP08226 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.41□□□□□ -0.26
ApoeP08226 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
ApoeP08226 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.41□□□□□ -0.26
ApoeP08226 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms