Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifna1P01572 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifna1P01572 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ifna1P01572 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ifna1P01572 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifna1P01572 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifna1P01572 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ifna1P01572 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifna1P01572 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifna1P01572 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.98□□□□□ -0.49
Ifna1P01572 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifna1P01572 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifna1P01572 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifna1P01572 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifna1P01572 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifna1P01572 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.97□□□□□ -0.49
Ifna1P01572 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ifna1P01572 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifna1P01572 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ifna1P01572 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifna1P01572 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifna1P01572 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
Ifna1P01572 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifna1P01572 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.97□□□□□ -0.49
Ifna1P01572 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifna1P01572 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.97□□□□□ -0.49
Ifna1P01572 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifna1P01572 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ifna1P01572 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifna1P01572 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.97□□□□□ -0.49
Ifna1P01572 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifna1P01572 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ifna1P01572 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ifna1P01572 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Ifna1P01572 Gm27459-201ENSMUST00000184860 107 ntBASIC11.97□□□□□ -0.49
Ifna1P01572 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ifna1P01572 Gm2272-201ENSMUST00000194903 582 ntBASIC11.97□□□□□ -0.49
Ifna1P01572 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifna1P01572 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ifna1P01572 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.97□□□□□ -0.49
Ifna1P01572 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
Ifna1P01572 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifna1P01572 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ifna1P01572 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifna1P01572 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ifna1P01572 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifna1P01572 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ifna1P01572 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifna1P01572 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ifna1P01572 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ifna1P01572 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifna1P01572 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifna1P01572 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ifna1P01572 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ifna1P01572 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.96□□□□□ -0.49
Ifna1P01572 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.96□□□□□ -0.49
Ifna1P01572 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ifna1P01572 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.96□□□□□ -0.49
Ifna1P01572 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.96□□□□□ -0.49
Ifna1P01572 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ifna1P01572 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ifna1P01572 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ifna1P01572 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ifna1P01572 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ifna1P01572 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ifna1P01572 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ifna1P01572 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ifna1P01572 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.96□□□□□ -0.49
Ifna1P01572 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ifna1P01572 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ifna1P01572 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ifna1P01572 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.96□□□□□ -0.49
Ifna1P01572 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.96□□□□□ -0.49
Ifna1P01572 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ifna1P01572 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.96□□□□□ -0.49
Ifna1P01572 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.96□□□□□ -0.49
Ifna1P01572 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ifna1P01572 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ifna1P01572 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ifna1P01572 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ifna1P01572 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.96□□□□□ -0.49
Ifna1P01572 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Ifna1P01572 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ifna1P01572 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
Ifna1P01572 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.96□□□□□ -0.5
Ifna1P01572 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ifna1P01572 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
Ifna1P01572 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ifna1P01572 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ifna1P01572 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ifna1P01572 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Ifna1P01572 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ifna1P01572 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ifna1P01572 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ifna1P01572 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ifna1P01572 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ifna1P01572 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ifna1P01572 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.95□□□□□ -0.5
Ifna1P01572 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ifna1P01572 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms