Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vti1aO89116 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vti1aO89116 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vti1aO89116 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.3■□□□□ 0.04
Vti1aO89116 Gm23984-201ENSMUST00000157139 203 ntBASIC15.3■□□□□ 0.04
Vti1aO89116 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vti1aO89116 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vti1aO89116 Gm3436-201ENSMUST00000179930 840 ntBASIC15.3■□□□□ 0.04
Vti1aO89116 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.3■□□□□ 0.04
Vti1aO89116 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.3■□□□□ 0.04
Vti1aO89116 Gm28631-201ENSMUST00000190740 334 ntBASIC15.3■□□□□ 0.04
Vti1aO89116 Gm2451-201ENSMUST00000199447 999 ntBASIC15.3■□□□□ 0.04
Vti1aO89116 Gm10290-201ENSMUST00000200451 999 ntBASIC15.3■□□□□ 0.04
Vti1aO89116 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.3■□□□□ 0.04
Vti1aO89116 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vti1aO89116 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vti1aO89116 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vti1aO89116 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vti1aO89116 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vti1aO89116 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vti1aO89116 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vti1aO89116 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vti1aO89116 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vti1aO89116 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Vti1aO89116 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vti1aO89116 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vti1aO89116 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vti1aO89116 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vti1aO89116 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vti1aO89116 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vti1aO89116 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Vti1aO89116 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vti1aO89116 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vti1aO89116 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vti1aO89116 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vti1aO89116 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vti1aO89116 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vti1aO89116 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vti1aO89116 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vti1aO89116 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.29■□□□□ 0.04
Vti1aO89116 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vti1aO89116 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.29■□□□□ 0.04
Vti1aO89116 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vti1aO89116 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.29■□□□□ 0.04
Vti1aO89116 Gm9726-201ENSMUST00000180321 678 ntBASIC15.29■□□□□ 0.04
Vti1aO89116 Gm6745-201ENSMUST00000199216 526 ntBASIC15.29■□□□□ 0.04
Vti1aO89116 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Vti1aO89116 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.29■□□□□ 0.04
Vti1aO89116 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Vti1aO89116 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vti1aO89116 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vti1aO89116 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vti1aO89116 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vti1aO89116 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vti1aO89116 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vti1aO89116 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vti1aO89116 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.29■□□□□ 0.04
Vti1aO89116 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vti1aO89116 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Vti1aO89116 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vti1aO89116 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.28■□□□□ 0.04
Vti1aO89116 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vti1aO89116 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vti1aO89116 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Vti1aO89116 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vti1aO89116 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vti1aO89116 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vti1aO89116 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vti1aO89116 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.28■□□□□ 0.04
Vti1aO89116 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vti1aO89116 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vti1aO89116 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vti1aO89116 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.28■□□□□ 0.04
Vti1aO89116 Gm43703-201ENSMUST00000200523 763 ntBASIC15.28■□□□□ 0.04
Vti1aO89116 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.28■□□□□ 0.04
Vti1aO89116 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vti1aO89116 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Vti1aO89116 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vti1aO89116 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vti1aO89116 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Vti1aO89116 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vti1aO89116 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Vti1aO89116 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Vti1aO89116 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vti1aO89116 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vti1aO89116 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vti1aO89116 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Vti1aO89116 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vti1aO89116 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Vti1aO89116 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vti1aO89116 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vti1aO89116 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Vti1aO89116 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Vti1aO89116 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vti1aO89116 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.27■□□□□ 0.04
Vti1aO89116 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vti1aO89116 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Vti1aO89116 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Vti1aO89116 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vti1aO89116 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms