Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.67□□□□□ -0.38
CcnkO88874 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CcnkO88874 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CcnkO88874 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CcnkO88874 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CcnkO88874 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.66□□□□□ -0.38
CcnkO88874 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.66□□□□□ -0.38
CcnkO88874 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CcnkO88874 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.66□□□□□ -0.38
CcnkO88874 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CcnkO88874 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CcnkO88874 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.66□□□□□ -0.38
CcnkO88874 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CcnkO88874 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CcnkO88874 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CcnkO88874 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CcnkO88874 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CcnkO88874 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CcnkO88874 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
CcnkO88874 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CcnkO88874 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CcnkO88874 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CcnkO88874 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CcnkO88874 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CcnkO88874 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CcnkO88874 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.66□□□□□ -0.38
CcnkO88874 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CcnkO88874 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CcnkO88874 Gm12350-201ENSMUST00000121208 462 ntBASIC12.66□□□□□ -0.38
CcnkO88874 Mir5131-201ENSMUST00000175426 93 ntBASIC12.66□□□□□ -0.38
CcnkO88874 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CcnkO88874 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
CcnkO88874 Gm18246-201ENSMUST00000221023 728 ntBASIC12.66□□□□□ -0.38
CcnkO88874 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.66□□□□□ -0.38
CcnkO88874 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CcnkO88874 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CcnkO88874 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CcnkO88874 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CcnkO88874 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CcnkO88874 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CcnkO88874 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CcnkO88874 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.66□□□□□ -0.38
CcnkO88874 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CcnkO88874 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CcnkO88874 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CcnkO88874 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CcnkO88874 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CcnkO88874 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcnkO88874 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CcnkO88874 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcnkO88874 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcnkO88874 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcnkO88874 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcnkO88874 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcnkO88874 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcnkO88874 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CcnkO88874 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CcnkO88874 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
CcnkO88874 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcnkO88874 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.65□□□□□ -0.38
CcnkO88874 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.65□□□□□ -0.38
CcnkO88874 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.65□□□□□ -0.38
CcnkO88874 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcnkO88874 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcnkO88874 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.65□□□□□ -0.38
CcnkO88874 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcnkO88874 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcnkO88874 Gm27628-201ENSMUST00000184911 107 ntBASIC12.65□□□□□ -0.38
CcnkO88874 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.65□□□□□ -0.38
CcnkO88874 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.65□□□□□ -0.38
CcnkO88874 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CcnkO88874 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.65□□□□□ -0.38
CcnkO88874 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CcnkO88874 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcnkO88874 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcnkO88874 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcnkO88874 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CcnkO88874 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.65□□□□□ -0.38
CcnkO88874 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.65□□□□□ -0.38
CcnkO88874 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcnkO88874 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcnkO88874 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcnkO88874 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CcnkO88874 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcnkO88874 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
CcnkO88874 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CcnkO88874 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
CcnkO88874 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CcnkO88874 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcnkO88874 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CcnkO88874 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms