Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim1O70400 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Pdlim1O70400 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim1O70400 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim1O70400 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.03□□□□□ -0.16
Pdlim1O70400 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.03□□□□□ -0.16
Pdlim1O70400 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim1O70400 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim1O70400 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim1O70400 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.03□□□□□ -0.16
Pdlim1O70400 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.03□□□□□ -0.16
Pdlim1O70400 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.03□□□□□ -0.16
Pdlim1O70400 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pdlim1O70400 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim1O70400 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim1O70400 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim1O70400 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim1O70400 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim1O70400 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pdlim1O70400 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pdlim1O70400 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pdlim1O70400 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pdlim1O70400 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pdlim1O70400 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pdlim1O70400 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Pdlim1O70400 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pdlim1O70400 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Pdlim1O70400 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Pdlim1O70400 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pdlim1O70400 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim1O70400 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim1O70400 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim1O70400 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.02□□□□□ -0.17
Pdlim1O70400 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim1O70400 Gm3436-201ENSMUST00000179930 840 ntBASIC14.02□□□□□ -0.17
Pdlim1O70400 Gm33320-201ENSMUST00000192232 530 ntBASIC14.02□□□□□ -0.17
Pdlim1O70400 Gm38294-201ENSMUST00000192831 381 ntBASIC14.02□□□□□ -0.17
Pdlim1O70400 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.02□□□□□ -0.17
Pdlim1O70400 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.02□□□□□ -0.17
Pdlim1O70400 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim1O70400 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.02□□□□□ -0.17
Pdlim1O70400 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim1O70400 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Pdlim1O70400 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim1O70400 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim1O70400 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim1O70400 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim1O70400 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim1O70400 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim1O70400 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim1O70400 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim1O70400 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.02□□□□□ -0.17
Pdlim1O70400 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Pdlim1O70400 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim1O70400 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.02□□□□□ -0.17
Pdlim1O70400 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.02□□□□□ -0.17
Pdlim1O70400 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim1O70400 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim1O70400 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim1O70400 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim1O70400 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim1O70400 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim1O70400 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim1O70400 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim1O70400 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim1O70400 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim1O70400 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim1O70400 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim1O70400 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.01□□□□□ -0.17
Pdlim1O70400 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim1O70400 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.01□□□□□ -0.17
Pdlim1O70400 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Pdlim1O70400 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim1O70400 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.01□□□□□ -0.17
Pdlim1O70400 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.01□□□□□ -0.17
Pdlim1O70400 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim1O70400 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.01□□□□□ -0.17
Pdlim1O70400 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim1O70400 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim1O70400 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim1O70400 Gm9063-201ENSMUST00000223299 582 ntBASIC14.01□□□□□ -0.17
Pdlim1O70400 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim1O70400 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Pdlim1O70400 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim1O70400 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim1O70400 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pdlim1O70400 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pdlim1O70400 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim1O70400 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Pdlim1O70400 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim1O70400 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.01□□□□□ -0.17
Pdlim1O70400 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.01□□□□□ -0.17
Pdlim1O70400 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim1O70400 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pdlim1O70400 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim1O70400 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.01□□□□□ -0.17
Pdlim1O70400 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pdlim1O70400 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim1O70400 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.01□□□□□ -0.17
Pdlim1O70400 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms