Protein–RNA interactions for Protein: O35185

Bhlhe40, Class E basic helix-loop-helix protein 40, mousemouse

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe40O35185 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Bhlhe40O35185 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Bhlhe40O35185 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Bhlhe40O35185 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Bhlhe40O35185 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Bhlhe40O35185 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.94□□□□□ -0.18
Bhlhe40O35185 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.94□□□□□ -0.18
Bhlhe40O35185 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.94□□□□□ -0.18
Bhlhe40O35185 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Bhlhe40O35185 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Bhlhe40O35185 Gm6180-201ENSMUST00000065243 498 ntBASIC13.94□□□□□ -0.18
Bhlhe40O35185 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Bhlhe40O35185 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Bhlhe40O35185 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.94□□□□□ -0.18
Bhlhe40O35185 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.94□□□□□ -0.18
Bhlhe40O35185 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Bhlhe40O35185 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Bhlhe40O35185 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Bhlhe40O35185 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Bhlhe40O35185 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Bhlhe40O35185 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Bhlhe40O35185 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Bhlhe40O35185 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Bhlhe40O35185 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Bhlhe40O35185 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Bhlhe40O35185 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Bhlhe40O35185 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Bhlhe40O35185 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Bhlhe40O35185 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Bhlhe40O35185 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Bhlhe40O35185 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Bhlhe40O35185 Gm6912-201ENSMUST00000117218 544 ntBASIC13.93□□□□□ -0.18
Bhlhe40O35185 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.93□□□□□ -0.18
Bhlhe40O35185 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.93□□□□□ -0.18
Bhlhe40O35185 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Bhlhe40O35185 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Bhlhe40O35185 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Bhlhe40O35185 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.93□□□□□ -0.18
Bhlhe40O35185 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.93□□□□□ -0.18
Bhlhe40O35185 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.93□□□□□ -0.18
Bhlhe40O35185 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Bhlhe40O35185 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Bhlhe40O35185 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Bhlhe40O35185 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Bhlhe40O35185 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Bhlhe40O35185 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Bhlhe40O35185 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Bhlhe40O35185 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Bhlhe40O35185 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Bhlhe40O35185 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Bhlhe40O35185 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Bhlhe40O35185 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Bhlhe40O35185 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Bhlhe40O35185 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Bhlhe40O35185 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Bhlhe40O35185 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Bhlhe40O35185 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.92□□□□□ -0.18
Bhlhe40O35185 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.92□□□□□ -0.18
Bhlhe40O35185 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Bhlhe40O35185 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Bhlhe40O35185 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Bhlhe40O35185 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Bhlhe40O35185 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Bhlhe40O35185 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Bhlhe40O35185 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Bhlhe40O35185 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Bhlhe40O35185 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.92□□□□□ -0.18
Bhlhe40O35185 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.92□□□□□ -0.18
Bhlhe40O35185 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.92□□□□□ -0.18
Bhlhe40O35185 Gm21470-201ENSMUST00000187680 696 ntBASIC13.92□□□□□ -0.18
Bhlhe40O35185 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.92□□□□□ -0.18
Bhlhe40O35185 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.92□□□□□ -0.18
Bhlhe40O35185 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Bhlhe40O35185 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Bhlhe40O35185 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Bhlhe40O35185 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Bhlhe40O35185 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Bhlhe40O35185 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Bhlhe40O35185 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Bhlhe40O35185 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Bhlhe40O35185 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.92□□□□□ -0.18
Bhlhe40O35185 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Bhlhe40O35185 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Bhlhe40O35185 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Bhlhe40O35185 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Bhlhe40O35185 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms