Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NpcdF8VQB8 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
NpcdF8VQB8 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
NpcdF8VQB8 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NpcdF8VQB8 Gm8775-201ENSMUST00000170943 1327 ntBASIC17.02■□□□□ 0.32
NpcdF8VQB8 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NpcdF8VQB8 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NpcdF8VQB8 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NpcdF8VQB8 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NpcdF8VQB8 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NpcdF8VQB8 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NpcdF8VQB8 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NpcdF8VQB8 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NpcdF8VQB8 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
NpcdF8VQB8 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NpcdF8VQB8 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
NpcdF8VQB8 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NpcdF8VQB8 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NpcdF8VQB8 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC17.02■□□□□ 0.32
NpcdF8VQB8 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC17.02■□□□□ 0.32
NpcdF8VQB8 Gm24196-201ENSMUST00000179161 110 ntBASIC17.02■□□□□ 0.32
NpcdF8VQB8 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NpcdF8VQB8 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC17.02■□□□□ 0.32
NpcdF8VQB8 AC121598.1-201ENSMUST00000228224 1019 ntBASIC17.02■□□□□ 0.32
NpcdF8VQB8 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NpcdF8VQB8 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NpcdF8VQB8 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NpcdF8VQB8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NpcdF8VQB8 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.02■□□□□ 0.32
NpcdF8VQB8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NpcdF8VQB8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NpcdF8VQB8 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NpcdF8VQB8 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.01■□□□□ 0.31
NpcdF8VQB8 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NpcdF8VQB8 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Gm43818-201ENSMUST00000200605 466 ntBASIC17.01■□□□□ 0.31
NpcdF8VQB8 Gm40466-201ENSMUST00000212174 422 ntBASIC17.01■□□□□ 0.31
NpcdF8VQB8 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NpcdF8VQB8 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.01■□□□□ 0.31
NpcdF8VQB8 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NpcdF8VQB8 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC17■□□□□ 0.31
NpcdF8VQB8 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NpcdF8VQB8 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NpcdF8VQB8 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
NpcdF8VQB8 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NpcdF8VQB8 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17■□□□□ 0.31
NpcdF8VQB8 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17■□□□□ 0.31
NpcdF8VQB8 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC17■□□□□ 0.31
NpcdF8VQB8 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC17■□□□□ 0.31
NpcdF8VQB8 AC192088.1-201ENSMUST00000227561 301 ntBASIC17■□□□□ 0.31
NpcdF8VQB8 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NpcdF8VQB8 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
NpcdF8VQB8 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NpcdF8VQB8 Gm10313-201ENSMUST00000095320 1002 ntBASIC17■□□□□ 0.31
NpcdF8VQB8 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
NpcdF8VQB8 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NpcdF8VQB8 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NpcdF8VQB8 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
NpcdF8VQB8 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NpcdF8VQB8 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
NpcdF8VQB8 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NpcdF8VQB8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NpcdF8VQB8 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NpcdF8VQB8 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17■□□□□ 0.31
NpcdF8VQB8 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
NpcdF8VQB8 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NpcdF8VQB8 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NpcdF8VQB8 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC16.99■□□□□ 0.31
NpcdF8VQB8 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NpcdF8VQB8 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NpcdF8VQB8 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms