Protein–RNA interactions for Protein: E9Q5E2

BC005561, cDNA sequence BC005561, mousemouse

Predictions only

Length 1,589 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC005561E9Q5E2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
BC005561E9Q5E2 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
BC005561E9Q5E2 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
BC005561E9Q5E2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
BC005561E9Q5E2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC21.32■■□□□ 1
BC005561E9Q5E2 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC21.32■■□□□ 1
BC005561E9Q5E2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC21.32■■□□□ 1
BC005561E9Q5E2 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC21.32■■□□□ 1
BC005561E9Q5E2 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC21.32■■□□□ 1
BC005561E9Q5E2 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BC005561E9Q5E2 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC21.32■■□□□ 1
BC005561E9Q5E2 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BC005561E9Q5E2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BC005561E9Q5E2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BC005561E9Q5E2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
BC005561E9Q5E2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC21.32■■□□□ 1
BC005561E9Q5E2 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BC005561E9Q5E2 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BC005561E9Q5E2 Gm11964-201ENSMUST00000120982 444 ntBASIC21.31■■□□□ 1
BC005561E9Q5E2 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC21.31■■□□□ 1
BC005561E9Q5E2 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BC005561E9Q5E2 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
BC005561E9Q5E2 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BC005561E9Q5E2 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC21.31■■□□□ 1
BC005561E9Q5E2 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BC005561E9Q5E2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
BC005561E9Q5E2 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BC005561E9Q5E2 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC21.31■■□□□ 1
BC005561E9Q5E2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
BC005561E9Q5E2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC21.31■■□□□ 1
BC005561E9Q5E2 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
BC005561E9Q5E2 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
BC005561E9Q5E2 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC21.31■■□□□ 1
BC005561E9Q5E2 Gm18630-201ENSMUST00000222109 1397 ntBASIC21.31■■□□□ 1
BC005561E9Q5E2 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BC005561E9Q5E2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BC005561E9Q5E2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BC005561E9Q5E2 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BC005561E9Q5E2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC21.31■■□□□ 1
BC005561E9Q5E2 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC21.31■■□□□ 1
BC005561E9Q5E2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
BC005561E9Q5E2 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC21.31■■□□□ 1
BC005561E9Q5E2 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC21.31■■□□□ 1
BC005561E9Q5E2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC21.31■■□□□ 1
BC005561E9Q5E2 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC21.31■■□□□ 1
BC005561E9Q5E2 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
BC005561E9Q5E2 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC21.31■■□□□ 1
BC005561E9Q5E2 CT573086.1-201ENSMUST00000227202 1074 ntBASIC21.31■■□□□ 1
BC005561E9Q5E2 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BC005561E9Q5E2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
BC005561E9Q5E2 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BC005561E9Q5E2 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
BC005561E9Q5E2 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC21.3■■□□□ 1
BC005561E9Q5E2 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC21.3■■□□□ 1
BC005561E9Q5E2 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BC005561E9Q5E2 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC21.3■■□□□ 1
BC005561E9Q5E2 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC21.3■■□□□ 1
BC005561E9Q5E2 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC21.3■■□□□ 1
BC005561E9Q5E2 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC21.3■■□□□ 1
BC005561E9Q5E2 Gm10608-202ENSMUST00000213924 676 ntBASIC21.3■■□□□ 1
BC005561E9Q5E2 Gm14608-201ENSMUST00000120030 1553 ntBASIC21.3■■□□□ 1
BC005561E9Q5E2 Gm8793-201ENSMUST00000183069 1303 ntBASIC21.3■■□□□ 1
BC005561E9Q5E2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
BC005561E9Q5E2 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC21.3■■□□□ 1
BC005561E9Q5E2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
BC005561E9Q5E2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC21.29■■□□□ 1
BC005561E9Q5E2 Gm6015-201ENSMUST00000217493 1586 ntBASIC21.29■■□□□ 1
BC005561E9Q5E2 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
BC005561E9Q5E2 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC21.29■■□□□ 1
BC005561E9Q5E2 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC21.29■■□□□ 1
BC005561E9Q5E2 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC21.29■■□□□ 1
BC005561E9Q5E2 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
BC005561E9Q5E2 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BC005561E9Q5E2 Gm29787-201ENSMUST00000222129 849 ntBASIC21.29■■□□□ 1
BC005561E9Q5E2 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BC005561E9Q5E2 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BC005561E9Q5E2 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC21.29■■□□□ 1
BC005561E9Q5E2 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BC005561E9Q5E2 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
BC005561E9Q5E2 Gm45630-201ENSMUST00000210243 1911 ntBASIC21.29■■□□□ 1
BC005561E9Q5E2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BC005561E9Q5E2 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BC005561E9Q5E2 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BC005561E9Q5E2 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BC005561E9Q5E2 Gm16479-201ENSMUST00000121706 932 ntBASIC21.28■■□□□ 1
BC005561E9Q5E2 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC21.28■■□□□ 1
BC005561E9Q5E2 Gm27341-201ENSMUST00000183570 106 ntBASIC21.28■■□□□ 1
BC005561E9Q5E2 Mir6979-201ENSMUST00000183927 56 ntBASIC21.28■■□□□ 1
BC005561E9Q5E2 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC21.28■■□□□ 1
BC005561E9Q5E2 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BC005561E9Q5E2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
BC005561E9Q5E2 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BC005561E9Q5E2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
BC005561E9Q5E2 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BC005561E9Q5E2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BC005561E9Q5E2 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
BC005561E9Q5E2 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BC005561E9Q5E2 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
BC005561E9Q5E2 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BC005561E9Q5E2 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms