Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28043E0CXC2 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28043E0CXC2 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28043E0CXC2 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28043E0CXC2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.26□□□□□ -0.13
Gm28043E0CXC2 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28043E0CXC2 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28043E0CXC2 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28043E0CXC2 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28043E0CXC2 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28043E0CXC2 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
Gm28043E0CXC2 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28043E0CXC2 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Gm28043E0CXC2 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28043E0CXC2 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Gm28043E0CXC2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28043E0CXC2 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.25□□□□□ -0.13
Gm28043E0CXC2 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.25□□□□□ -0.13
Gm28043E0CXC2 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28043E0CXC2 Gm14494-201ENSMUST00000118786 435 ntBASIC14.25□□□□□ -0.13
Gm28043E0CXC2 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.25□□□□□ -0.13
Gm28043E0CXC2 Gm8000-201ENSMUST00000188378 592 ntBASIC14.25□□□□□ -0.13
Gm28043E0CXC2 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.25□□□□□ -0.13
Gm28043E0CXC2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28043E0CXC2 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.25□□□□□ -0.13
Gm28043E0CXC2 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28043E0CXC2 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28043E0CXC2 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28043E0CXC2 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.25□□□□□ -0.13
Gm28043E0CXC2 Gm10154-201ENSMUST00000084445 354 ntBASIC14.25□□□□□ -0.13
Gm28043E0CXC2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28043E0CXC2 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28043E0CXC2 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28043E0CXC2 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28043E0CXC2 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28043E0CXC2 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28043E0CXC2 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28043E0CXC2 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Gm28043E0CXC2 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28043E0CXC2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Gm28043E0CXC2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28043E0CXC2 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28043E0CXC2 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Gm28043E0CXC2 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Gm28043E0CXC2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28043E0CXC2 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28043E0CXC2 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28043E0CXC2 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Gm28043E0CXC2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Gm28043E0CXC2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28043E0CXC2 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
Gm28043E0CXC2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28043E0CXC2 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28043E0CXC2 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28043E0CXC2 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28043E0CXC2 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28043E0CXC2 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Gm28043E0CXC2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28043E0CXC2 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28043E0CXC2 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28043E0CXC2 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.24□□□□□ -0.13
Gm28043E0CXC2 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28043E0CXC2 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28043E0CXC2 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28043E0CXC2 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28043E0CXC2 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28043E0CXC2 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28043E0CXC2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Gm28043E0CXC2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Gm28043E0CXC2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28043E0CXC2 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28043E0CXC2 Gm16026-204ENSMUST00000162652 683 ntBASIC14.23□□□□□ -0.13
Gm28043E0CXC2 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Gm28043E0CXC2 Gm5264-201ENSMUST00000190584 848 ntBASIC14.23□□□□□ -0.13
Gm28043E0CXC2 Gm44492-201ENSMUST00000197012 141 ntBASIC14.23□□□□□ -0.13
Gm28043E0CXC2 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28043E0CXC2 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28043E0CXC2 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28043E0CXC2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28043E0CXC2 Gm10175-201ENSMUST00000086013 645 ntBASIC14.23□□□□□ -0.13
Gm28043E0CXC2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Gm28043E0CXC2 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28043E0CXC2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28043E0CXC2 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28043E0CXC2 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.23□□□□□ -0.13
Gm28043E0CXC2 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28043E0CXC2 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28043E0CXC2 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28043E0CXC2 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28043E0CXC2 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28043E0CXC2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28043E0CXC2 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28043E0CXC2 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Gm28043E0CXC2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Gm28043E0CXC2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28043E0CXC2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28043E0CXC2 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Gm28043E0CXC2 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28043E0CXC2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28043E0CXC2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms