Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Gm11025-201ENSMUST00000140773 466 ntBASIC15.54■□□□□ 0.08
Trim30cD3YVI9 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.54■□□□□ 0.08
Trim30cD3YVI9 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim30cD3YVI9 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim30cD3YVI9 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim30cD3YVI9 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim30cD3YVI9 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trim30cD3YVI9 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim30cD3YVI9 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trim30cD3YVI9 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
Trim30cD3YVI9 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim30cD3YVI9 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim30cD3YVI9 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim30cD3YVI9 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim30cD3YVI9 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim30cD3YVI9 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trim30cD3YVI9 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.53■□□□□ 0.08
Trim30cD3YVI9 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 Rpph1-201ENSMUST00000175096 319 ntBASIC15.53■□□□□ 0.08
Trim30cD3YVI9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 Gm45612-201ENSMUST00000211320 160 ntBASIC15.53■□□□□ 0.08
Trim30cD3YVI9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.53■□□□□ 0.08
Trim30cD3YVI9 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.53■□□□□ 0.08
Trim30cD3YVI9 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim30cD3YVI9 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.52■□□□□ 0.08
Trim30cD3YVI9 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim30cD3YVI9 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trim30cD3YVI9 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim30cD3YVI9 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trim30cD3YVI9 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim30cD3YVI9 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim30cD3YVI9 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.52■□□□□ 0.08
Trim30cD3YVI9 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim30cD3YVI9 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim30cD3YVI9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim30cD3YVI9 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim30cD3YVI9 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim30cD3YVI9 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Trim30cD3YVI9 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim30cD3YVI9 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim30cD3YVI9 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.52■□□□□ 0.08
Trim30cD3YVI9 Gm27494-201ENSMUST00000184735 189 ntBASIC15.52■□□□□ 0.08
Trim30cD3YVI9 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim30cD3YVI9 Gm43767-201ENSMUST00000198933 381 ntBASIC15.52■□□□□ 0.08
Trim30cD3YVI9 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.52■□□□□ 0.08
Trim30cD3YVI9 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.52■□□□□ 0.08
Trim30cD3YVI9 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.52■□□□□ 0.08
Trim30cD3YVI9 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim30cD3YVI9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim30cD3YVI9 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.07
Trim30cD3YVI9 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trim30cD3YVI9 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim30cD3YVI9 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trim30cD3YVI9 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim30cD3YVI9 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Trim30cD3YVI9 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim30cD3YVI9 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Trim30cD3YVI9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim30cD3YVI9 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trim30cD3YVI9 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim30cD3YVI9 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
Trim30cD3YVI9 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trim30cD3YVI9 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim30cD3YVI9 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim30cD3YVI9 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim30cD3YVI9 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.52■□□□□ 0.07
Trim30cD3YVI9 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim30cD3YVI9 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Trim30cD3YVI9 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim30cD3YVI9 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trim30cD3YVI9 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms