Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Col4a6B1AVK5 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.33□□□□□ -0.12
Col4a6B1AVK5 Gm38158-201ENSMUST00000194617 339 ntBASIC14.33□□□□□ -0.12
Col4a6B1AVK5 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.33□□□□□ -0.12
Col4a6B1AVK5 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a6B1AVK5 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Col4a6B1AVK5 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Col4a6B1AVK5 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a6B1AVK5 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a6B1AVK5 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a6B1AVK5 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.32□□□□□ -0.12
Col4a6B1AVK5 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a6B1AVK5 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Col4a6B1AVK5 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.32□□□□□ -0.12
Col4a6B1AVK5 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Col4a6B1AVK5 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a6B1AVK5 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a6B1AVK5 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Col4a6B1AVK5 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a6B1AVK5 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a6B1AVK5 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.32□□□□□ -0.12
Col4a6B1AVK5 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a6B1AVK5 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a6B1AVK5 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a6B1AVK5 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.32□□□□□ -0.12
Col4a6B1AVK5 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Col4a6B1AVK5 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a6B1AVK5 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.32□□□□□ -0.12
Col4a6B1AVK5 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.32□□□□□ -0.12
Col4a6B1AVK5 Cts7-204ENSMUST00000225321 1257 ntBASIC14.32□□□□□ -0.12
Col4a6B1AVK5 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Col4a6B1AVK5 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Col4a6B1AVK5 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a6B1AVK5 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a6B1AVK5 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a6B1AVK5 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a6B1AVK5 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a6B1AVK5 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Col4a6B1AVK5 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Col4a6B1AVK5 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a6B1AVK5 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a6B1AVK5 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
Col4a6B1AVK5 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a6B1AVK5 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a6B1AVK5 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.31□□□□□ -0.12
Col4a6B1AVK5 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a6B1AVK5 Gm22323-201ENSMUST00000103832 109 ntBASIC14.31□□□□□ -0.12
Col4a6B1AVK5 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.31□□□□□ -0.12
Col4a6B1AVK5 Gm13786-201ENSMUST00000122371 333 ntBASIC14.31□□□□□ -0.12
Col4a6B1AVK5 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.31□□□□□ -0.12
Col4a6B1AVK5 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.31□□□□□ -0.12
Col4a6B1AVK5 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.31□□□□□ -0.12
Col4a6B1AVK5 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a6B1AVK5 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.31□□□□□ -0.12
Col4a6B1AVK5 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.31□□□□□ -0.12
Col4a6B1AVK5 Gm25927-201ENSMUST00000175058 117 ntBASIC14.31□□□□□ -0.12
Col4a6B1AVK5 Gm26461-201ENSMUST00000175064 290 ntBASIC14.31□□□□□ -0.12
Col4a6B1AVK5 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.31□□□□□ -0.12
Col4a6B1AVK5 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a6B1AVK5 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a6B1AVK5 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a6B1AVK5 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a6B1AVK5 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a6B1AVK5 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a6B1AVK5 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.31□□□□□ -0.12
Col4a6B1AVK5 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.31□□□□□ -0.12
Col4a6B1AVK5 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Gm13342-201ENSMUST00000121055 207 ntBASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Gm29396-201ENSMUST00000185659 716 ntBASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.3□□□□□ -0.12
Col4a6B1AVK5 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms