Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Col6a4A2AX52 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a4A2AX52 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a4A2AX52 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a4A2AX52 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Col6a4A2AX52 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a4A2AX52 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.95□□□□□ -0.5
Col6a4A2AX52 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Col6a4A2AX52 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.95□□□□□ -0.5
Col6a4A2AX52 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a4A2AX52 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Gm44443-201ENSMUST00000204396 5633 ntBASIC11.95□□□□□ -0.5
Col6a4A2AX52 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a4A2AX52 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.95□□□□□ -0.5
Col6a4A2AX52 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.95□□□□□ -0.5
Col6a4A2AX52 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.95□□□□□ -0.5
Col6a4A2AX52 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Gm18827-201ENSMUST00000188341 790 ntBASIC11.95□□□□□ -0.5
Col6a4A2AX52 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.95□□□□□ -0.5
Col6a4A2AX52 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Olfr286-202ENSMUST00000205305 969 ntBASIC11.95□□□□□ -0.5
Col6a4A2AX52 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.95□□□□□ -0.5
Col6a4A2AX52 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.95□□□□□ -0.5
Col6a4A2AX52 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a4A2AX52 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC11.95□□□□□ -0.5
Col6a4A2AX52 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a4A2AX52 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.94□□□□□ -0.5
Col6a4A2AX52 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a4A2AX52 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Gm5187-201ENSMUST00000117317 991 ntBASIC11.94□□□□□ -0.5
Col6a4A2AX52 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.94□□□□□ -0.5
Col6a4A2AX52 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a4A2AX52 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.94□□□□□ -0.5
Col6a4A2AX52 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms