Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Gm8318-201ENSMUST00000182954 872 ntBASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Gm6443-201ENSMUST00000203599 874 ntBASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Gm44771-201ENSMUST00000206975 626 ntBASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav6n-6A0A075B6B2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Gm42670-201ENSMUST00000201816 1292 ntBASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav6n-6A0A075B6B2 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav6n-6A0A075B6B2 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms