Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.07□□□□□ -0.64
CcsQ9WU84 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
CcsQ9WU84 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
CcsQ9WU84 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 Gm4609-201ENSMUST00000106443 1002 ntBASIC11.07□□□□□ -0.64
CcsQ9WU84 Gm5138-201ENSMUST00000113842 1002 ntBASIC11.07□□□□□ -0.64
CcsQ9WU84 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.07□□□□□ -0.64
CcsQ9WU84 Gm15191-201ENSMUST00000117933 1000 ntBASIC11.07□□□□□ -0.64
CcsQ9WU84 Gm12182-201ENSMUST00000118655 1008 ntBASIC11.07□□□□□ -0.64
CcsQ9WU84 Gm13882-201ENSMUST00000120886 1002 ntBASIC11.07□□□□□ -0.64
CcsQ9WU84 Gm11780-201ENSMUST00000136880 516 ntBASIC11.07□□□□□ -0.64
CcsQ9WU84 Gm10284-201ENSMUST00000145057 1005 ntBASIC11.07□□□□□ -0.64
CcsQ9WU84 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
CcsQ9WU84 Gm10481-201ENSMUST00000179228 1002 ntBASIC11.07□□□□□ -0.64
CcsQ9WU84 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC11.07□□□□□ -0.64
CcsQ9WU84 Gm2574-201ENSMUST00000181051 1002 ntBASIC11.07□□□□□ -0.64
CcsQ9WU84 Gm3200-201ENSMUST00000181493 1002 ntBASIC11.07□□□□□ -0.64
CcsQ9WU84 Gm8825-201ENSMUST00000182565 998 ntBASIC11.07□□□□□ -0.64
CcsQ9WU84 Gm4518-201ENSMUST00000182638 718 ntBASIC11.07□□□□□ -0.64
CcsQ9WU84 Gm8330-201ENSMUST00000182754 1008 ntBASIC11.07□□□□□ -0.64
CcsQ9WU84 Gm4575-201ENSMUST00000182991 1002 ntBASIC11.07□□□□□ -0.64
CcsQ9WU84 Gm8709-201ENSMUST00000183230 1012 ntBASIC11.07□□□□□ -0.64
CcsQ9WU84 Gm6089-201ENSMUST00000197666 938 ntBASIC11.07□□□□□ -0.64
CcsQ9WU84 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 Gm10293-201ENSMUST00000076317 1002 ntBASIC11.07□□□□□ -0.64
CcsQ9WU84 Gm6316-201ENSMUST00000082064 1020 ntBASIC11.07□□□□□ -0.64
CcsQ9WU84 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
CcsQ9WU84 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
CcsQ9WU84 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.07□□□□□ -0.64
CcsQ9WU84 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.07□□□□□ -0.64
CcsQ9WU84 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.07□□□□□ -0.64
CcsQ9WU84 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
CcsQ9WU84 Paupar-201ENSMUST00000194826 3482 ntBASIC11.06□□□□□ -0.64
CcsQ9WU84 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
CcsQ9WU84 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.06□□□□□ -0.64
CcsQ9WU84 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC11.06□□□□□ -0.64
CcsQ9WU84 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
CcsQ9WU84 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
CcsQ9WU84 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.06□□□□□ -0.64
CcsQ9WU84 Mir5131-201ENSMUST00000175426 93 ntBASIC11.06□□□□□ -0.64
CcsQ9WU84 Mir5126-201ENSMUST00000175513 77 ntBASIC11.06□□□□□ -0.64
CcsQ9WU84 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.06□□□□□ -0.64
CcsQ9WU84 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
CcsQ9WU84 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
CcsQ9WU84 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CcsQ9WU84 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms