Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Gm15957-201ENSMUST00000118893 974 ntBASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Gm12428-201ENSMUST00000119844 727 ntBASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Gm23547-201ENSMUST00000158210 271 ntBASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Gm27321-201ENSMUST00000185021 205 ntBASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Gm20949-201ENSMUST00000206478 952 ntBASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Gm9063-201ENSMUST00000223299 582 ntBASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Gm14057-201ENSMUST00000120631 482 ntBASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Mir8102-201ENSMUST00000184148 139 ntBASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Gm9229-201ENSMUST00000222777 126 ntBASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ssmem1Q9D9Y8 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.27□□□□□ -0.44
Ssmem1Q9D9Y8 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ssmem1Q9D9Y8 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ssmem1Q9D9Y8 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ssmem1Q9D9Y8 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ssmem1Q9D9Y8 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Ssmem1Q9D9Y8 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ssmem1Q9D9Y8 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ssmem1Q9D9Y8 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ssmem1Q9D9Y8 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms