Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gm27785-201ENSMUST00000184268 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm27466-201ENSMUST00000184396 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm27703-201ENSMUST00000184836 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm21451-201ENSMUST00000111062 2775 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp4bQ9D8B3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp4bQ9D8B3 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp4bQ9D8B3 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp4bQ9D8B3 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.9■□□□□ 0.46
Chmp4bQ9D8B3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.9■□□□□ 0.46
Chmp4bQ9D8B3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp4bQ9D8B3 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.9■□□□□ 0.46
Chmp4bQ9D8B3 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.9■□□□□ 0.46
Chmp4bQ9D8B3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp4bQ9D8B3 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.9■□□□□ 0.46
Chmp4bQ9D8B3 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC17.9■□□□□ 0.46
Chmp4bQ9D8B3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp4bQ9D8B3 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Chmp4bQ9D8B3 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp4bQ9D8B3 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp4bQ9D8B3 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp4bQ9D8B3 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp4bQ9D8B3 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Chmp4bQ9D8B3 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp4bQ9D8B3 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp4bQ9D8B3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Chmp4bQ9D8B3 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Chmp4bQ9D8B3 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Chmp4bQ9D8B3 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC17.89■□□□□ 0.46
Chmp4bQ9D8B3 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Chmp4bQ9D8B3 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC17.89■□□□□ 0.46
Chmp4bQ9D8B3 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Chmp4bQ9D8B3 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 BC001981-202ENSMUST00000191393 1545 ntBASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 Gm24158-201ENSMUST00000175263 71 ntBASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 Gm44335-201ENSMUST00000196879 141 ntBASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 Gm44297-201ENSMUST00000198304 141 ntBASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 Gm44346-201ENSMUST00000198851 141 ntBASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 AC121598.1-201ENSMUST00000228224 1019 ntBASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 Gm38102-201ENSMUST00000192791 1935 ntBASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp4bQ9D8B3 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp4bQ9D8B3 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp4bQ9D8B3 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp4bQ9D8B3 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp4bQ9D8B3 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Chmp4bQ9D8B3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp4bQ9D8B3 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.88■□□□□ 0.45
Chmp4bQ9D8B3 Gm13015-201ENSMUST00000118674 204 ntBASIC17.88■□□□□ 0.45
Chmp4bQ9D8B3 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.88■□□□□ 0.45
Chmp4bQ9D8B3 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.88■□□□□ 0.45
Chmp4bQ9D8B3 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.88■□□□□ 0.45
Chmp4bQ9D8B3 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp4bQ9D8B3 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp4bQ9D8B3 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp4bQ9D8B3 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp4bQ9D8B3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp4bQ9D8B3 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp4bQ9D8B3 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp4bQ9D8B3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp4bQ9D8B3 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp4bQ9D8B3 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Chmp4bQ9D8B3 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC17.88■□□□□ 0.45
Chmp4bQ9D8B3 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp4bQ9D8B3 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp4bQ9D8B3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Chmp4bQ9D8B3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp4bQ9D8B3 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms