Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp5Q9D7S9 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.79■□□□□ 0.44
Chmp5Q9D7S9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp5Q9D7S9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp5Q9D7S9 Thap2-203ENSMUST00000218989 527 ntBASIC17.79■□□□□ 0.44
Chmp5Q9D7S9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.79■□□□□ 0.44
Chmp5Q9D7S9 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Chmp5Q9D7S9 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp5Q9D7S9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Chmp5Q9D7S9 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Chmp5Q9D7S9 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp5Q9D7S9 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp5Q9D7S9 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Chmp5Q9D7S9 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp5Q9D7S9 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC17.79■□□□□ 0.44
Chmp5Q9D7S9 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp5Q9D7S9 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp5Q9D7S9 Gm15889-202ENSMUST00000212669 2443 ntBASIC17.79■□□□□ 0.44
Chmp5Q9D7S9 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp5Q9D7S9 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp5Q9D7S9 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp5Q9D7S9 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp5Q9D7S9 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp5Q9D7S9 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp5Q9D7S9 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp5Q9D7S9 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp5Q9D7S9 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp5Q9D7S9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp5Q9D7S9 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp5Q9D7S9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp5Q9D7S9 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp5Q9D7S9 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp5Q9D7S9 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Chmp5Q9D7S9 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC17.78■□□□□ 0.44
Chmp5Q9D7S9 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp5Q9D7S9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp5Q9D7S9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp5Q9D7S9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.78■□□□□ 0.44
Chmp5Q9D7S9 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Chmp5Q9D7S9 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Chmp5Q9D7S9 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Chmp5Q9D7S9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp5Q9D7S9 Gm10275-202ENSMUST00000168697 495 ntBASIC17.78■□□□□ 0.44
Chmp5Q9D7S9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.78■□□□□ 0.44
Chmp5Q9D7S9 Gm5177-201ENSMUST00000183092 997 ntBASIC17.78■□□□□ 0.44
Chmp5Q9D7S9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp5Q9D7S9 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.78■□□□□ 0.44
Chmp5Q9D7S9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp5Q9D7S9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp5Q9D7S9 Gm10275-201ENSMUST00000092620 635 ntBASIC17.78■□□□□ 0.44
Chmp5Q9D7S9 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp5Q9D7S9 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp5Q9D7S9 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp5Q9D7S9 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp5Q9D7S9 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Chmp5Q9D7S9 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp5Q9D7S9 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp5Q9D7S9 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp5Q9D7S9 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Chmp5Q9D7S9 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp5Q9D7S9 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp5Q9D7S9 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp5Q9D7S9 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp5Q9D7S9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp5Q9D7S9 Mir5126-201ENSMUST00000175513 77 ntBASIC17.77■□□□□ 0.44
Chmp5Q9D7S9 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Chmp5Q9D7S9 Gm17971-201ENSMUST00000190239 806 ntBASIC17.77■□□□□ 0.44
Chmp5Q9D7S9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.77■□□□□ 0.44
Chmp5Q9D7S9 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp5Q9D7S9 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp5Q9D7S9 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp5Q9D7S9 Gm42928-201ENSMUST00000197338 3339 ntBASIC17.77■□□□□ 0.44
Chmp5Q9D7S9 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp5Q9D7S9 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp5Q9D7S9 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp5Q9D7S9 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp5Q9D7S9 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp5Q9D7S9 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC17.77■□□□□ 0.43
Chmp5Q9D7S9 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Chmp5Q9D7S9 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp5Q9D7S9 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp5Q9D7S9 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp5Q9D7S9 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp5Q9D7S9 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp5Q9D7S9 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp5Q9D7S9 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp5Q9D7S9 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Chmp5Q9D7S9 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp5Q9D7S9 Ksr1-207ENSMUST00000226282 5260 ntBASIC17.76■□□□□ 0.43
Chmp5Q9D7S9 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp5Q9D7S9 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Chmp5Q9D7S9 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp5Q9D7S9 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.76■□□□□ 0.43
Chmp5Q9D7S9 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Chmp5Q9D7S9 Gm13884-201ENSMUST00000118103 829 ntBASIC17.76■□□□□ 0.43
Chmp5Q9D7S9 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp5Q9D7S9 Gm27301-201ENSMUST00000184012 127 ntBASIC17.76■□□□□ 0.43
Chmp5Q9D7S9 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.76■□□□□ 0.43
Chmp5Q9D7S9 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.76■□□□□ 0.43
Chmp5Q9D7S9 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms