Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Stag1Q9D3E6 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
Stag1Q9D3E6 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Stag1Q9D3E6 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.9■□□□□ 0.3
Stag1Q9D3E6 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Stag1Q9D3E6 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Stag1Q9D3E6 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Stag1Q9D3E6 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Stag1Q9D3E6 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Stag1Q9D3E6 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Stag1Q9D3E6 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Stag1Q9D3E6 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Stag1Q9D3E6 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Stag1Q9D3E6 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Stag1Q9D3E6 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Stag1Q9D3E6 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Stag1Q9D3E6 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Stag1Q9D3E6 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.89■□□□□ 0.29
Stag1Q9D3E6 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.89■□□□□ 0.29
Stag1Q9D3E6 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Stag1Q9D3E6 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Stag1Q9D3E6 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Stag1Q9D3E6 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Stag1Q9D3E6 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.89■□□□□ 0.29
Stag1Q9D3E6 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Stag1Q9D3E6 Gm5279-201ENSMUST00000199575 745 ntBASIC16.89■□□□□ 0.29
Stag1Q9D3E6 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Stag1Q9D3E6 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Stag1Q9D3E6 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Stag1Q9D3E6 Gm17795-201ENSMUST00000214505 757 ntBASIC16.89■□□□□ 0.29
Stag1Q9D3E6 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.89■□□□□ 0.29
Stag1Q9D3E6 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Stag1Q9D3E6 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.89■□□□□ 0.29
Stag1Q9D3E6 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Stag1Q9D3E6 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Stag1Q9D3E6 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Stag1Q9D3E6 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC16.89■□□□□ 0.29
Stag1Q9D3E6 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.89■□□□□ 0.29
Stag1Q9D3E6 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Stag1Q9D3E6 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Stag1Q9D3E6 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Stag1Q9D3E6 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Stag1Q9D3E6 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Stag1Q9D3E6 Gm12341-201ENSMUST00000119724 503 ntBASIC16.88■□□□□ 0.29
Stag1Q9D3E6 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Stag1Q9D3E6 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Stag1Q9D3E6 Gm5425-201ENSMUST00000214125 459 ntBASIC16.88■□□□□ 0.29
Stag1Q9D3E6 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.88■□□□□ 0.29
Stag1Q9D3E6 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.88■□□□□ 0.29
Stag1Q9D3E6 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Stag1Q9D3E6 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.88■□□□□ 0.29
Stag1Q9D3E6 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Stag1Q9D3E6 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Stag1Q9D3E6 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.88■□□□□ 0.29
Stag1Q9D3E6 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Stag1Q9D3E6 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Stag1Q9D3E6 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Stag1Q9D3E6 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.88■□□□□ 0.29
Stag1Q9D3E6 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Stag1Q9D3E6 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Stag1Q9D3E6 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Stag1Q9D3E6 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Stag1Q9D3E6 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Stag1Q9D3E6 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Stag1Q9D3E6 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Stag1Q9D3E6 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stag1Q9D3E6 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Stag1Q9D3E6 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stag1Q9D3E6 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms