Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rpusd4Q9CWX4 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpusd4Q9CWX4 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Rpusd4Q9CWX4 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rpusd4Q9CWX4 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpusd4Q9CWX4 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpusd4Q9CWX4 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Rpusd4Q9CWX4 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpusd4Q9CWX4 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rpusd4Q9CWX4 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpusd4Q9CWX4 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 Gm16198-201ENSMUST00000118766 670 ntBASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpusd4Q9CWX4 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Gm24513-201ENSMUST00000174964 138 ntBASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Gm27397-201ENSMUST00000184997 107 ntBASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Gm45612-201ENSMUST00000211320 160 ntBASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Rpusd4Q9CWX4 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpusd4Q9CWX4 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpusd4Q9CWX4 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rpusd4Q9CWX4 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rpusd4Q9CWX4 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rpusd4Q9CWX4 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpusd4Q9CWX4 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpusd4Q9CWX4 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpusd4Q9CWX4 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rpusd4Q9CWX4 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.05□□□□□ -0.48
Rpusd4Q9CWX4 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpusd4Q9CWX4 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpusd4Q9CWX4 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpusd4Q9CWX4 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms