Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tlr3Q99MB1 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Tlr3Q99MB1 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.28■□□□□ 0.04
Tlr3Q99MB1 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tlr3Q99MB1 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tlr3Q99MB1 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.28■□□□□ 0.04
Tlr3Q99MB1 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tlr3Q99MB1 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.28■□□□□ 0.04
Tlr3Q99MB1 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tlr3Q99MB1 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.28■□□□□ 0.04
Tlr3Q99MB1 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.28■□□□□ 0.04
Tlr3Q99MB1 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tlr3Q99MB1 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tlr3Q99MB1 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tlr3Q99MB1 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tlr3Q99MB1 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tlr3Q99MB1 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.28■□□□□ 0.04
Tlr3Q99MB1 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tlr3Q99MB1 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tlr3Q99MB1 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tlr3Q99MB1 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.27■□□□□ 0.04
Tlr3Q99MB1 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tlr3Q99MB1 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tlr3Q99MB1 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tlr3Q99MB1 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.27■□□□□ 0.04
Tlr3Q99MB1 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tlr3Q99MB1 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tlr3Q99MB1 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Tlr3Q99MB1 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.27■□□□□ 0.04
Tlr3Q99MB1 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Tlr3Q99MB1 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.27■□□□□ 0.04
Tlr3Q99MB1 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.27■□□□□ 0.04
Tlr3Q99MB1 Gm18766-201ENSMUST00000189811 808 ntBASIC15.27■□□□□ 0.04
Tlr3Q99MB1 Gm29541-201ENSMUST00000191351 678 ntBASIC15.27■□□□□ 0.04
Tlr3Q99MB1 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tlr3Q99MB1 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tlr3Q99MB1 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tlr3Q99MB1 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tlr3Q99MB1 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tlr3Q99MB1 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tlr3Q99MB1 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tlr3Q99MB1 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tlr3Q99MB1 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tlr3Q99MB1 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Tlr3Q99MB1 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Tlr3Q99MB1 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tlr3Q99MB1 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tlr3Q99MB1 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tlr3Q99MB1 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tlr3Q99MB1 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Tlr3Q99MB1 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Tlr3Q99MB1 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Tlr3Q99MB1 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tlr3Q99MB1 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Tlr3Q99MB1 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tlr3Q99MB1 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tlr3Q99MB1 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tlr3Q99MB1 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Tlr3Q99MB1 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tlr3Q99MB1 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.26■□□□□ 0.03
Tlr3Q99MB1 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.26■□□□□ 0.03
Tlr3Q99MB1 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tlr3Q99MB1 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tlr3Q99MB1 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.26■□□□□ 0.03
Tlr3Q99MB1 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tlr3Q99MB1 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Tlr3Q99MB1 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tlr3Q99MB1 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Tlr3Q99MB1 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tlr3Q99MB1 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tlr3Q99MB1 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tlr3Q99MB1 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Tlr3Q99MB1 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tlr3Q99MB1 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tlr3Q99MB1 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Gm12428-201ENSMUST00000119844 727 ntBASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 AA619741-201ENSMUST00000195095 646 ntBASIC15.25■□□□□ 0.03
Tlr3Q99MB1 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms