Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf3Q99LI7 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf3Q99LI7 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf3Q99LI7 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf3Q99LI7 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.77□□□□□ -0.21
Cstf3Q99LI7 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf3Q99LI7 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf3Q99LI7 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf3Q99LI7 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Cstf3Q99LI7 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf3Q99LI7 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf3Q99LI7 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf3Q99LI7 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
Cstf3Q99LI7 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cstf3Q99LI7 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf3Q99LI7 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf3Q99LI7 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf3Q99LI7 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf3Q99LI7 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf3Q99LI7 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.76□□□□□ -0.21
Cstf3Q99LI7 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf3Q99LI7 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.76□□□□□ -0.21
Cstf3Q99LI7 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf3Q99LI7 Gm11779-201ENSMUST00000118541 368 ntBASIC13.76□□□□□ -0.21
Cstf3Q99LI7 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.76□□□□□ -0.21
Cstf3Q99LI7 Gm15467-201ENSMUST00000120582 445 ntBASIC13.76□□□□□ -0.21
Cstf3Q99LI7 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf3Q99LI7 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.76□□□□□ -0.21
Cstf3Q99LI7 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cstf3Q99LI7 Gm45612-201ENSMUST00000211320 160 ntBASIC13.76□□□□□ -0.21
Cstf3Q99LI7 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf3Q99LI7 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf3Q99LI7 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf3Q99LI7 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cstf3Q99LI7 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf3Q99LI7 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf3Q99LI7 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf3Q99LI7 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf3Q99LI7 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cstf3Q99LI7 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cstf3Q99LI7 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cstf3Q99LI7 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Gm6443-201ENSMUST00000203599 874 ntBASIC13.75□□□□□ -0.21
Cstf3Q99LI7 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.75□□□□□ -0.21
Cstf3Q99LI7 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Gm10175-201ENSMUST00000086013 645 ntBASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cstf3Q99LI7 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cstf3Q99LI7 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cstf3Q99LI7 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cstf3Q99LI7 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cstf3Q99LI7 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.74□□□□□ -0.21
Cstf3Q99LI7 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cstf3Q99LI7 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cstf3Q99LI7 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.74□□□□□ -0.21
Cstf3Q99LI7 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cstf3Q99LI7 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Cstf3Q99LI7 Gm14494-201ENSMUST00000118786 435 ntBASIC13.74□□□□□ -0.21
Cstf3Q99LI7 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.74□□□□□ -0.21
Cstf3Q99LI7 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.74□□□□□ -0.21
Cstf3Q99LI7 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.74□□□□□ -0.21
Cstf3Q99LI7 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.74□□□□□ -0.21
Cstf3Q99LI7 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.74□□□□□ -0.21
Cstf3Q99LI7 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cstf3Q99LI7 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cstf3Q99LI7 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cstf3Q99LI7 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.74□□□□□ -0.21
Cstf3Q99LI7 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cstf3Q99LI7 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cstf3Q99LI7 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cstf3Q99LI7 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cstf3Q99LI7 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cstf3Q99LI7 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Cstf3Q99LI7 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms