Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Gm14042-201ENSMUST00000120139 833 ntBASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Gm3436-201ENSMUST00000179930 840 ntBASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Gm9522-201ENSMUST00000182394 926 ntBASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.05□□□□□ -0.16
Clcc1Q99LI2 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcc1Q99LI2 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Clcc1Q99LI2 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clcc1Q99LI2 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.04□□□□□ -0.16
Clcc1Q99LI2 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.04□□□□□ -0.16
Clcc1Q99LI2 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 Gm9229-201ENSMUST00000222777 126 ntBASIC14.04□□□□□ -0.16
Clcc1Q99LI2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.04□□□□□ -0.16
Clcc1Q99LI2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcc1Q99LI2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcc1Q99LI2 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcc1Q99LI2 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcc1Q99LI2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.03□□□□□ -0.16
Clcc1Q99LI2 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcc1Q99LI2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcc1Q99LI2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcc1Q99LI2 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clcc1Q99LI2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clcc1Q99LI2 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcc1Q99LI2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.03□□□□□ -0.16
Clcc1Q99LI2 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcc1Q99LI2 Gm12859-201ENSMUST00000117834 427 ntBASIC14.03□□□□□ -0.16
Clcc1Q99LI2 Gm6916-202ENSMUST00000205523 195 ntBASIC14.03□□□□□ -0.16
Clcc1Q99LI2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcc1Q99LI2 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcc1Q99LI2 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcc1Q99LI2 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Clcc1Q99LI2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcc1Q99LI2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Clcc1Q99LI2 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Clcc1Q99LI2 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clcc1Q99LI2 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcc1Q99LI2 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcc1Q99LI2 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Clcc1Q99LI2 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Clcc1Q99LI2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcc1Q99LI2 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Clcc1Q99LI2 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Clcc1Q99LI2 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Clcc1Q99LI2 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clcc1Q99LI2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms