Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Gm43347-201ENSMUST00000200226 580 ntBASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd1Q99J36 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 AV026068-213ENSMUST00000223675 1171 ntBASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Thumpd1Q99J36 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd1Q99J36 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.66□□□□□ -0.38
Thumpd1Q99J36 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Thumpd1Q99J36 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd1Q99J36 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.66□□□□□ -0.38
Thumpd1Q99J36 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd1Q99J36 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd1Q99J36 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.66□□□□□ -0.38
Thumpd1Q99J36 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.66□□□□□ -0.38
Thumpd1Q99J36 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd1Q99J36 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Thumpd1Q99J36 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.66□□□□□ -0.38
Thumpd1Q99J36 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms