Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha2Q91Y17 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha2Q91Y17 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.13■□□□□ 0.01
Pcdha2Q91Y17 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.13■□□□□ 0.01
Pcdha2Q91Y17 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha2Q91Y17 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha2Q91Y17 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.13■□□□□ 0.01
Pcdha2Q91Y17 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha2Q91Y17 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pcdha2Q91Y17 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdha2Q91Y17 Gm18027-201ENSMUST00000218947 619 ntBASIC15.13■□□□□ 0.01
Pcdha2Q91Y17 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.13■□□□□ 0.01
Pcdha2Q91Y17 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha2Q91Y17 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha2Q91Y17 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha2Q91Y17 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha2Q91Y17 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.13■□□□□ 0.01
Pcdha2Q91Y17 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha2Q91Y17 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha2Q91Y17 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha2Q91Y17 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha2Q91Y17 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha2Q91Y17 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha2Q91Y17 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha2Q91Y17 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pcdha2Q91Y17 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha2Q91Y17 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdha2Q91Y17 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Pcdha2Q91Y17 Gm21470-201ENSMUST00000187680 696 ntBASIC15.12■□□□□ 0.01
Pcdha2Q91Y17 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha2Q91Y17 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.12■□□□□ 0.01
Pcdha2Q91Y17 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.12■□□□□ 0.01
Pcdha2Q91Y17 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.12■□□□□ 0.01
Pcdha2Q91Y17 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.12■□□□□ 0.01
Pcdha2Q91Y17 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha2Q91Y17 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha2Q91Y17 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Pcdha2Q91Y17 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.12■□□□□ 0.01
Pcdha2Q91Y17 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha2Q91Y17 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha2Q91Y17 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha2Q91Y17 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.12■□□□□ 0.01
Pcdha2Q91Y17 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pcdha2Q91Y17 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha2Q91Y17 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha2Q91Y17 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdha2Q91Y17 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Gm12585-201ENSMUST00000117307 290 ntBASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Gm14057-201ENSMUST00000120631 482 ntBASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Gm14719-201ENSMUST00000121891 340 ntBASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.11■□□□□ 0.01
Pcdha2Q91Y17 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha2Q91Y17 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdha2Q91Y17 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha2Q91Y17 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha2Q91Y17 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha2Q91Y17 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha2Q91Y17 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Pcdha2Q91Y17 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha2Q91Y17 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Pcdha2Q91Y17 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.1■□□□□ 0.01
Pcdha2Q91Y17 Gm15393-201ENSMUST00000120499 219 ntBASIC15.1■□□□□ 0.01
Pcdha2Q91Y17 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha2Q91Y17 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Pcdha2Q91Y17 Gm27838-201ENSMUST00000184829 128 ntBASIC15.1■□□□□ 0.01
Pcdha2Q91Y17 Gm29667-201ENSMUST00000190817 490 ntBASIC15.1■□□□□ 0.01
Pcdha2Q91Y17 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Pcdha2Q91Y17 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha2Q91Y17 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha2Q91Y17 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms