Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb2Q91Y00 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.12■□□□□ 0.01
Pcdhb2Q91Y00 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb2Q91Y00 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb2Q91Y00 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Gm12882-201ENSMUST00000121696 517 ntBASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Gm27989-201ENSMUST00000184721 107 ntBASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Gm46209-201ENSMUST00000217912 553 ntBASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.11■□□□□ 0.01
Pcdhb2Q91Y00 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Mir8102-201ENSMUST00000184148 139 ntBASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb2Q91Y00 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Pcdhb2Q91Y00 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb2Q91Y00 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb2Q91Y00 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb2Q91Y00 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb2Q91Y00 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb2Q91Y00 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb2Q91Y00 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb2Q91Y00 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb2Q91Y00 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb2Q91Y00 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.09■□□□□ 0.01
Pcdhb2Q91Y00 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb2Q91Y00 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb2Q91Y00 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdhb2Q91Y00 Gm27306-201ENSMUST00000183970 107 ntBASIC15.09■□□□□ 0.01
Pcdhb2Q91Y00 Gm27680-201ENSMUST00000184192 160 ntBASIC15.09■□□□□ 0.01
Pcdhb2Q91Y00 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Pcdhb2Q91Y00 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb2Q91Y00 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb2Q91Y00 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb2Q91Y00 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb2Q91Y00 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb2Q91Y00 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb2Q91Y00 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb2Q91Y00 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb2Q91Y00 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb2Q91Y00 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb2Q91Y00 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb2Q91Y00 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms