Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
StrcQ8VIM6 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
StrcQ8VIM6 Gm22042-201ENSMUST00000082989 165 ntBASIC16.54■□□□□ 0.24
StrcQ8VIM6 Gm26232-201ENSMUST00000083360 166 ntBASIC16.54■□□□□ 0.24
StrcQ8VIM6 Gm24136-201ENSMUST00000083374 165 ntBASIC16.54■□□□□ 0.24
StrcQ8VIM6 Rnu1b6-201ENSMUST00000083839 166 ntBASIC16.54■□□□□ 0.24
StrcQ8VIM6 Gm26110-201ENSMUST00000083971 165 ntBASIC16.54■□□□□ 0.24
StrcQ8VIM6 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
StrcQ8VIM6 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
StrcQ8VIM6 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC16.54■□□□□ 0.24
StrcQ8VIM6 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
StrcQ8VIM6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
StrcQ8VIM6 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
StrcQ8VIM6 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
StrcQ8VIM6 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.54■□□□□ 0.24
StrcQ8VIM6 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
StrcQ8VIM6 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
StrcQ8VIM6 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
StrcQ8VIM6 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
StrcQ8VIM6 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.54■□□□□ 0.24
StrcQ8VIM6 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
StrcQ8VIM6 Gm18244-201ENSMUST00000219747 1566 ntBASIC16.54■□□□□ 0.24
StrcQ8VIM6 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
StrcQ8VIM6 Gm16202-201ENSMUST00000117532 544 ntBASIC16.54■□□□□ 0.24
StrcQ8VIM6 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.54■□□□□ 0.24
StrcQ8VIM6 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC16.54■□□□□ 0.24
StrcQ8VIM6 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC16.54■□□□□ 0.24
StrcQ8VIM6 Gm37489-201ENSMUST00000191883 159 ntBASIC16.54■□□□□ 0.24
StrcQ8VIM6 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
StrcQ8VIM6 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
StrcQ8VIM6 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
StrcQ8VIM6 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
StrcQ8VIM6 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
StrcQ8VIM6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
StrcQ8VIM6 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
StrcQ8VIM6 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
StrcQ8VIM6 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
StrcQ8VIM6 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
StrcQ8VIM6 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
StrcQ8VIM6 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
StrcQ8VIM6 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.53■□□□□ 0.24
StrcQ8VIM6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
StrcQ8VIM6 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC16.53■□□□□ 0.24
StrcQ8VIM6 Gm27341-201ENSMUST00000183570 106 ntBASIC16.53■□□□□ 0.24
StrcQ8VIM6 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.53■□□□□ 0.24
StrcQ8VIM6 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
StrcQ8VIM6 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
StrcQ8VIM6 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
StrcQ8VIM6 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
StrcQ8VIM6 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
StrcQ8VIM6 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
StrcQ8VIM6 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
StrcQ8VIM6 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
StrcQ8VIM6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
StrcQ8VIM6 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
StrcQ8VIM6 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
StrcQ8VIM6 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
StrcQ8VIM6 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
StrcQ8VIM6 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC16.53■□□□□ 0.24
StrcQ8VIM6 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
StrcQ8VIM6 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
StrcQ8VIM6 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
StrcQ8VIM6 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
StrcQ8VIM6 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
StrcQ8VIM6 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
StrcQ8VIM6 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
StrcQ8VIM6 Gm43947-201ENSMUST00000203019 959 ntBASIC16.52■□□□□ 0.24
StrcQ8VIM6 Gm5781-201ENSMUST00000219792 443 ntBASIC16.52■□□□□ 0.24
StrcQ8VIM6 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
StrcQ8VIM6 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
StrcQ8VIM6 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
StrcQ8VIM6 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
StrcQ8VIM6 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
StrcQ8VIM6 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
StrcQ8VIM6 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
StrcQ8VIM6 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
StrcQ8VIM6 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
StrcQ8VIM6 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
StrcQ8VIM6 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
StrcQ8VIM6 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
StrcQ8VIM6 B9d1os-201ENSMUST00000137010 674 ntBASIC16.52■□□□□ 0.23
StrcQ8VIM6 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
StrcQ8VIM6 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
StrcQ8VIM6 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
StrcQ8VIM6 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC16.52■□□□□ 0.23
StrcQ8VIM6 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
StrcQ8VIM6 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
StrcQ8VIM6 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
StrcQ8VIM6 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
StrcQ8VIM6 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
StrcQ8VIM6 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.51■□□□□ 0.23
StrcQ8VIM6 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
StrcQ8VIM6 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
StrcQ8VIM6 Gm43423-201ENSMUST00000198390 2094 ntBASIC16.51■□□□□ 0.23
StrcQ8VIM6 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC16.51■□□□□ 0.23
StrcQ8VIM6 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
StrcQ8VIM6 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
StrcQ8VIM6 Gm2260-201ENSMUST00000184965 657 ntBASIC16.51■□□□□ 0.23
StrcQ8VIM6 Morn2-202ENSMUST00000227729 656 ntBASIC16.51■□□□□ 0.23
StrcQ8VIM6 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms