Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Gm8584-201ENSMUST00000171982 758 ntBASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.25□□□□□ -0.13
Vps39Q8R5L3 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vps39Q8R5L3 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Vps39Q8R5L3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps39Q8R5L3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Vps39Q8R5L3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.24□□□□□ -0.13
Vps39Q8R5L3 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps39Q8R5L3 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps39Q8R5L3 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps39Q8R5L3 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps39Q8R5L3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.24□□□□□ -0.13
Vps39Q8R5L3 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps39Q8R5L3 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps39Q8R5L3 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps39Q8R5L3 Gm15467-201ENSMUST00000120582 445 ntBASIC14.24□□□□□ -0.13
Vps39Q8R5L3 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.24□□□□□ -0.13
Vps39Q8R5L3 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.24□□□□□ -0.13
Vps39Q8R5L3 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps39Q8R5L3 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps39Q8R5L3 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Vps39Q8R5L3 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps39Q8R5L3 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps39Q8R5L3 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps39Q8R5L3 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps39Q8R5L3 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps39Q8R5L3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Vps39Q8R5L3 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps39Q8R5L3 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps39Q8R5L3 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps39Q8R5L3 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.24□□□□□ -0.13
Vps39Q8R5L3 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps39Q8R5L3 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Gm20553-201ENSMUST00000204205 844 ntBASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms