Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC17.03■□□□□ 0.32
Top1mtQ8R4U6 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Top1mtQ8R4U6 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Top1mtQ8R4U6 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
Top1mtQ8R4U6 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Top1mtQ8R4U6 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Top1mtQ8R4U6 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Top1mtQ8R4U6 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Top1mtQ8R4U6 BC001981-202ENSMUST00000191393 1545 ntBASIC17.02■□□□□ 0.32
Top1mtQ8R4U6 AC115735.4-201ENSMUST00000227460 1944 ntBASIC17.02■□□□□ 0.32
Top1mtQ8R4U6 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Top1mtQ8R4U6 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Top1mtQ8R4U6 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Top1mtQ8R4U6 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Top1mtQ8R4U6 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Top1mtQ8R4U6 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.02■□□□□ 0.32
Top1mtQ8R4U6 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Top1mtQ8R4U6 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Top1mtQ8R4U6 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Top1mtQ8R4U6 Gm27631-201ENSMUST00000184163 466 ntBASIC17.02■□□□□ 0.32
Top1mtQ8R4U6 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC17.02■□□□□ 0.32
Top1mtQ8R4U6 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Top1mtQ8R4U6 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Top1mtQ8R4U6 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Top1mtQ8R4U6 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Top1mtQ8R4U6 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Top1mtQ8R4U6 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Top1mtQ8R4U6 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Top1mtQ8R4U6 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Top1mtQ8R4U6 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Top1mtQ8R4U6 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Top1mtQ8R4U6 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Top1mtQ8R4U6 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Top1mtQ8R4U6 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.31
Top1mtQ8R4U6 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Top1mtQ8R4U6 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Top1mtQ8R4U6 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Top1mtQ8R4U6 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.02■□□□□ 0.31
Top1mtQ8R4U6 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Top1mtQ8R4U6 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Top1mtQ8R4U6 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Top1mtQ8R4U6 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Top1mtQ8R4U6 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC17.01■□□□□ 0.31
Top1mtQ8R4U6 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Top1mtQ8R4U6 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Top1mtQ8R4U6 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Top1mtQ8R4U6 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Top1mtQ8R4U6 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Top1mtQ8R4U6 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Top1mtQ8R4U6 AA619741-201ENSMUST00000195095 646 ntBASIC17.01■□□□□ 0.31
Top1mtQ8R4U6 Gm5312-201ENSMUST00000203728 547 ntBASIC17.01■□□□□ 0.31
Top1mtQ8R4U6 Gm45453-201ENSMUST00000211758 853 ntBASIC17.01■□□□□ 0.31
Top1mtQ8R4U6 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Top1mtQ8R4U6 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Top1mtQ8R4U6 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Top1mtQ8R4U6 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Top1mtQ8R4U6 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Top1mtQ8R4U6 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Top1mtQ8R4U6 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Top1mtQ8R4U6 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Top1mtQ8R4U6 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Top1mtQ8R4U6 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Top1mtQ8R4U6 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC17.01■□□□□ 0.31
Top1mtQ8R4U6 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Top1mtQ8R4U6 Gm26513-201ENSMUST00000181802 2489 ntBASIC17.01■□□□□ 0.31
Top1mtQ8R4U6 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17■□□□□ 0.31
Top1mtQ8R4U6 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC17■□□□□ 0.31
Top1mtQ8R4U6 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Top1mtQ8R4U6 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Top1mtQ8R4U6 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Top1mtQ8R4U6 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Top1mtQ8R4U6 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC17■□□□□ 0.31
Top1mtQ8R4U6 Gm5566-201ENSMUST00000116118 459 ntBASIC17■□□□□ 0.31
Top1mtQ8R4U6 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC17■□□□□ 0.31
Top1mtQ8R4U6 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Top1mtQ8R4U6 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC17■□□□□ 0.31
Top1mtQ8R4U6 Gm10253-201ENSMUST00000194270 940 ntBASIC17■□□□□ 0.31
Top1mtQ8R4U6 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17■□□□□ 0.31
Top1mtQ8R4U6 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Top1mtQ8R4U6 Gm5779-201ENSMUST00000218467 910 ntBASIC17■□□□□ 0.31
Top1mtQ8R4U6 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC17■□□□□ 0.31
Top1mtQ8R4U6 AC140397.2-201ENSMUST00000224213 834 ntBASIC17■□□□□ 0.31
Top1mtQ8R4U6 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Top1mtQ8R4U6 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Top1mtQ8R4U6 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Top1mtQ8R4U6 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC17■□□□□ 0.31
Top1mtQ8R4U6 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC17■□□□□ 0.31
Top1mtQ8R4U6 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Top1mtQ8R4U6 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Top1mtQ8R4U6 Gm43056-201ENSMUST00000197865 2791 ntBASIC17■□□□□ 0.31
Top1mtQ8R4U6 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Top1mtQ8R4U6 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Top1mtQ8R4U6 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.99■□□□□ 0.31
Top1mtQ8R4U6 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Top1mtQ8R4U6 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Top1mtQ8R4U6 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.99■□□□□ 0.31
Top1mtQ8R4U6 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Top1mtQ8R4U6 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.99■□□□□ 0.31
Top1mtQ8R4U6 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Top1mtQ8R4U6 Gm9719-201ENSMUST00000162765 543 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms