Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc58Q8R3Q6 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.78□□□□□ -0.36
Ccdc58Q8R3Q6 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc58Q8R3Q6 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc58Q8R3Q6 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.78□□□□□ -0.36
Ccdc58Q8R3Q6 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc58Q8R3Q6 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.78□□□□□ -0.36
Ccdc58Q8R3Q6 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Ccdc58Q8R3Q6 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc58Q8R3Q6 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc58Q8R3Q6 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.78□□□□□ -0.36
Ccdc58Q8R3Q6 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc58Q8R3Q6 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc58Q8R3Q6 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc58Q8R3Q6 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc58Q8R3Q6 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc58Q8R3Q6 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc58Q8R3Q6 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc58Q8R3Q6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc58Q8R3Q6 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc58Q8R3Q6 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc58Q8R3Q6 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc58Q8R3Q6 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc58Q8R3Q6 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc58Q8R3Q6 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc58Q8R3Q6 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc58Q8R3Q6 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Ccdc58Q8R3Q6 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
Ccdc58Q8R3Q6 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc58Q8R3Q6 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Gm7222-201ENSMUST00000117512 906 ntBASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Gm13418-201ENSMUST00000119097 944 ntBASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Ccdc58Q8R3Q6 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Gm14859-201ENSMUST00000117752 357 ntBASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Gm13464-201ENSMUST00000119418 935 ntBASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Gm14042-201ENSMUST00000120139 833 ntBASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Gm13836-201ENSMUST00000121159 501 ntBASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Gm5682-201ENSMUST00000173402 505 ntBASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Pck2-205ENSMUST00000226352 2784 ntBASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc58Q8R3Q6 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms