Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Treml1Q8K558 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Treml1Q8K558 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Treml1Q8K558 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Treml1Q8K558 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Treml1Q8K558 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Treml1Q8K558 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Treml1Q8K558 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Treml1Q8K558 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Treml1Q8K558 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Treml1Q8K558 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Treml1Q8K558 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Treml1Q8K558 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Treml1Q8K558 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.02□□□□□ -0.17
Treml1Q8K558 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.02□□□□□ -0.17
Treml1Q8K558 Dupd1-202ENSMUST00000224735 548 ntBASIC14.02□□□□□ -0.17
Treml1Q8K558 Shd-206ENSMUST00000225145 998 ntBASIC14.02□□□□□ -0.17
Treml1Q8K558 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Treml1Q8K558 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Treml1Q8K558 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Treml1Q8K558 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Treml1Q8K558 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Treml1Q8K558 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.02□□□□□ -0.17
Treml1Q8K558 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Treml1Q8K558 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Treml1Q8K558 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Treml1Q8K558 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Treml1Q8K558 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Treml1Q8K558 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Treml1Q8K558 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Treml1Q8K558 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Treml1Q8K558 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Treml1Q8K558 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Treml1Q8K558 Gm24543-201ENSMUST00000103867 82 ntBASIC14.01□□□□□ -0.17
Treml1Q8K558 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.01□□□□□ -0.17
Treml1Q8K558 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Treml1Q8K558 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Treml1Q8K558 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Treml1Q8K558 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Treml1Q8K558 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Treml1Q8K558 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Treml1Q8K558 Gm45453-201ENSMUST00000211758 853 ntBASIC14.01□□□□□ -0.17
Treml1Q8K558 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Treml1Q8K558 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.01□□□□□ -0.17
Treml1Q8K558 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.01□□□□□ -0.17
Treml1Q8K558 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Treml1Q8K558 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.01□□□□□ -0.17
Treml1Q8K558 Mir125a-201ENSMUST00000083545 68 ntBASIC14.01□□□□□ -0.17
Treml1Q8K558 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Treml1Q8K558 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.01□□□□□ -0.17
Treml1Q8K558 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Treml1Q8K558 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.01□□□□□ -0.17
Treml1Q8K558 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Treml1Q8K558 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Treml1Q8K558 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Treml1Q8K558 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Treml1Q8K558 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Treml1Q8K558 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Treml1Q8K558 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Treml1Q8K558 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Treml1Q8K558 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Treml1Q8K558 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Treml1Q8K558 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Treml1Q8K558 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14□□□□□ -0.17
Treml1Q8K558 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Treml1Q8K558 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Treml1Q8K558 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14□□□□□ -0.17
Treml1Q8K558 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Treml1Q8K558 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14□□□□□ -0.17
Treml1Q8K558 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Treml1Q8K558 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Treml1Q8K558 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Treml1Q8K558 Gm27533-201ENSMUST00000183800 152 ntBASIC14□□□□□ -0.17
Treml1Q8K558 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Treml1Q8K558 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Treml1Q8K558 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14□□□□□ -0.17
Treml1Q8K558 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14□□□□□ -0.17
Treml1Q8K558 AC102291.3-201ENSMUST00000226566 405 ntBASIC14□□□□□ -0.17
Treml1Q8K558 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Treml1Q8K558 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Treml1Q8K558 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Treml1Q8K558 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Treml1Q8K558 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Treml1Q8K558 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Treml1Q8K558 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Treml1Q8K558 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Treml1Q8K558 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Treml1Q8K558 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Treml1Q8K558 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Treml1Q8K558 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Treml1Q8K558 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Treml1Q8K558 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Treml1Q8K558 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Treml1Q8K558 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Treml1Q8K558 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.99□□□□□ -0.17
Treml1Q8K558 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Treml1Q8K558 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Treml1Q8K558 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Treml1Q8K558 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.99□□□□□ -0.17
Treml1Q8K558 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms