Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.63■□□□□ 0.25
Usp44Q8C2S0 Gm14767-201ENSMUST00000121559 586 ntBASIC16.63■□□□□ 0.25
Usp44Q8C2S0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 Gm33320-201ENSMUST00000192232 530 ntBASIC16.63■□□□□ 0.25
Usp44Q8C2S0 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Gm15460-201ENSMUST00000118147 391 ntBASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Gm37714-201ENSMUST00000194742 342 ntBASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Usp44Q8C2S0 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Usp44Q8C2S0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp44Q8C2S0 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Usp44Q8C2S0 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp44Q8C2S0 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp44Q8C2S0 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp44Q8C2S0 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp44Q8C2S0 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.61■□□□□ 0.25
Usp44Q8C2S0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Usp44Q8C2S0 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp44Q8C2S0 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp44Q8C2S0 Gm15920-201ENSMUST00000118998 402 ntBASIC16.61■□□□□ 0.25
Usp44Q8C2S0 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Usp44Q8C2S0 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Usp44Q8C2S0 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.61■□□□□ 0.25
Usp44Q8C2S0 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Usp44Q8C2S0 Gm44872-201ENSMUST00000207864 420 ntBASIC16.61■□□□□ 0.25
Usp44Q8C2S0 Gm18027-201ENSMUST00000218947 619 ntBASIC16.61■□□□□ 0.25
Usp44Q8C2S0 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.61■□□□□ 0.25
Usp44Q8C2S0 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp44Q8C2S0 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
Usp44Q8C2S0 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Usp44Q8C2S0 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp44Q8C2S0 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp44Q8C2S0 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp44Q8C2S0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp44Q8C2S0 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp44Q8C2S0 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp44Q8C2S0 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Usp44Q8C2S0 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp44Q8C2S0 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp44Q8C2S0 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Usp44Q8C2S0 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.6■□□□□ 0.25
Usp44Q8C2S0 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp44Q8C2S0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp44Q8C2S0 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp44Q8C2S0 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp44Q8C2S0 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp44Q8C2S0 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms