Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.75□□□□□ -0.21
Cpne3Q8BT60 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Cpne3Q8BT60 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cpne3Q8BT60 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpne3Q8BT60 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpne3Q8BT60 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.75□□□□□ -0.21
Cpne3Q8BT60 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpne3Q8BT60 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Cpne3Q8BT60 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpne3Q8BT60 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Cpne3Q8BT60 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpne3Q8BT60 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cpne3Q8BT60 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.75□□□□□ -0.21
Cpne3Q8BT60 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpne3Q8BT60 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Cpne3Q8BT60 Gm5479-201ENSMUST00000160578 435 ntBASIC13.75□□□□□ -0.21
Cpne3Q8BT60 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cpne3Q8BT60 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpne3Q8BT60 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.75□□□□□ -0.21
Cpne3Q8BT60 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.75□□□□□ -0.21
Cpne3Q8BT60 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.75□□□□□ -0.21
Cpne3Q8BT60 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpne3Q8BT60 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpne3Q8BT60 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cpne3Q8BT60 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpne3Q8BT60 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpne3Q8BT60 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.75□□□□□ -0.21
Cpne3Q8BT60 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cpne3Q8BT60 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpne3Q8BT60 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpne3Q8BT60 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpne3Q8BT60 Acot6-202ENSMUST00000222921 3622 ntBASIC13.75□□□□□ -0.21
Cpne3Q8BT60 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Gm37230-201ENSMUST00000194491 818 ntBASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne3Q8BT60 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne3Q8BT60 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne3Q8BT60 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.73□□□□□ -0.21
Cpne3Q8BT60 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne3Q8BT60 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne3Q8BT60 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.73□□□□□ -0.21
Cpne3Q8BT60 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cpne3Q8BT60 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne3Q8BT60 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne3Q8BT60 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Cpne3Q8BT60 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Cpne3Q8BT60 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne3Q8BT60 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne3Q8BT60 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.73□□□□□ -0.21
Cpne3Q8BT60 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne3Q8BT60 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne3Q8BT60 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.73□□□□□ -0.21
Cpne3Q8BT60 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.73□□□□□ -0.21
Cpne3Q8BT60 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne3Q8BT60 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne3Q8BT60 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne3Q8BT60 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne3Q8BT60 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.73□□□□□ -0.21
Cpne3Q8BT60 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne3Q8BT60 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne3Q8BT60 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne3Q8BT60 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne3Q8BT60 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne3Q8BT60 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cpne3Q8BT60 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms