Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trnp1Q80ZI1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trnp1Q80ZI1 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trnp1Q80ZI1 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trnp1Q80ZI1 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trnp1Q80ZI1 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trnp1Q80ZI1 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trnp1Q80ZI1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trnp1Q80ZI1 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.9■□□□□ 0.14
Trnp1Q80ZI1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trnp1Q80ZI1 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Trnp1Q80ZI1 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Gm4971-201ENSMUST00000205991 1108 ntBASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Gm24447-201ENSMUST00000083977 338 ntBASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trnp1Q80ZI1 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 Gm4271-201ENSMUST00000174444 973 ntBASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trnp1Q80ZI1 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trnp1Q80ZI1 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trnp1Q80ZI1 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trnp1Q80ZI1 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trnp1Q80ZI1 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trnp1Q80ZI1 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trnp1Q80ZI1 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trnp1Q80ZI1 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trnp1Q80ZI1 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trnp1Q80ZI1 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trnp1Q80ZI1 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trnp1Q80ZI1 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trnp1Q80ZI1 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.87■□□□□ 0.13
Trnp1Q80ZI1 Gm5687-201ENSMUST00000118252 640 ntBASIC15.87■□□□□ 0.13
Trnp1Q80ZI1 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trnp1Q80ZI1 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC15.87■□□□□ 0.13
Trnp1Q80ZI1 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trnp1Q80ZI1 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
Trnp1Q80ZI1 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC15.87■□□□□ 0.13
Trnp1Q80ZI1 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC15.87■□□□□ 0.13
Trnp1Q80ZI1 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC15.87■□□□□ 0.13
Trnp1Q80ZI1 Gm37008-201ENSMUST00000195712 319 ntBASIC15.87■□□□□ 0.13
Trnp1Q80ZI1 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trnp1Q80ZI1 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trnp1Q80ZI1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trnp1Q80ZI1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trnp1Q80ZI1 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms