Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shank2Q80Z38 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC18.04■□□□□ 0.48
Shank2Q80Z38 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Shank2Q80Z38 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shank2Q80Z38 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Shank2Q80Z38 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank2Q80Z38 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Shank2Q80Z38 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Shank2Q80Z38 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank2Q80Z38 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank2Q80Z38 Gm2606-201ENSMUST00000100754 1002 ntBASIC18.03■□□□□ 0.48
Shank2Q80Z38 Gm12537-201ENSMUST00000119266 1002 ntBASIC18.03■□□□□ 0.48
Shank2Q80Z38 Gm12070-201ENSMUST00000119551 1002 ntBASIC18.03■□□□□ 0.48
Shank2Q80Z38 Gm12671-201ENSMUST00000119978 1002 ntBASIC18.03■□□□□ 0.48
Shank2Q80Z38 Gm13292-201ENSMUST00000120014 1000 ntBASIC18.03■□□□□ 0.48
Shank2Q80Z38 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Shank2Q80Z38 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank2Q80Z38 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC18.03■□□□□ 0.48
Shank2Q80Z38 Gm10359-201ENSMUST00000180167 1002 ntBASIC18.03■□□□□ 0.48
Shank2Q80Z38 Gm12033-201ENSMUST00000180654 1002 ntBASIC18.03■□□□□ 0.48
Shank2Q80Z38 Gm5559-201ENSMUST00000180755 1002 ntBASIC18.03■□□□□ 0.48
Shank2Q80Z38 Gm7293-201ENSMUST00000216682 1007 ntBASIC18.03■□□□□ 0.48
Shank2Q80Z38 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Shank2Q80Z38 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank2Q80Z38 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Shank2Q80Z38 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank2Q80Z38 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank2Q80Z38 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Shank2Q80Z38 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank2Q80Z38 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.03■□□□□ 0.48
Shank2Q80Z38 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank2Q80Z38 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank2Q80Z38 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank2Q80Z38 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank2Q80Z38 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Shank2Q80Z38 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank2Q80Z38 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank2Q80Z38 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Shank2Q80Z38 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shank2Q80Z38 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shank2Q80Z38 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shank2Q80Z38 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shank2Q80Z38 Gm11400-201ENSMUST00000120853 1214 ntBASIC18.02■□□□□ 0.48
Shank2Q80Z38 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Shank2Q80Z38 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC18.02■□□□□ 0.48
Shank2Q80Z38 Gm20482-202ENSMUST00000174729 825 ntBASIC18.02■□□□□ 0.48
Shank2Q80Z38 AC132384.14-201ENSMUST00000219346 1147 ntBASIC18.02■□□□□ 0.48
Shank2Q80Z38 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shank2Q80Z38 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shank2Q80Z38 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shank2Q80Z38 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shank2Q80Z38 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Shank2Q80Z38 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shank2Q80Z38 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC18.02■□□□□ 0.48
Shank2Q80Z38 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shank2Q80Z38 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shank2Q80Z38 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Shank2Q80Z38 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shank2Q80Z38 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Shank2Q80Z38 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Shank2Q80Z38 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Shank2Q80Z38 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Shank2Q80Z38 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.02■□□□□ 0.47
Shank2Q80Z38 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Shank2Q80Z38 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shank2Q80Z38 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shank2Q80Z38 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shank2Q80Z38 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Shank2Q80Z38 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shank2Q80Z38 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Shank2Q80Z38 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shank2Q80Z38 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Shank2Q80Z38 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Shank2Q80Z38 Gm27341-201ENSMUST00000183570 106 ntBASIC18.01■□□□□ 0.47
Shank2Q80Z38 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shank2Q80Z38 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Shank2Q80Z38 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shank2Q80Z38 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Shank2Q80Z38 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shank2Q80Z38 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Shank2Q80Z38 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Shank2Q80Z38 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shank2Q80Z38 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shank2Q80Z38 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Shank2Q80Z38 Gm6023-201ENSMUST00000118217 606 ntBASIC18.01■□□□□ 0.47
Shank2Q80Z38 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC18.01■□□□□ 0.47
Shank2Q80Z38 Gm16379-201ENSMUST00000161469 348 ntBASIC18.01■□□□□ 0.47
Shank2Q80Z38 Gm16505-201ENSMUST00000179981 232 ntBASIC18.01■□□□□ 0.47
Shank2Q80Z38 Gm8762-201ENSMUST00000193486 339 ntBASIC18.01■□□□□ 0.47
Shank2Q80Z38 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Shank2Q80Z38 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC18.01■□□□□ 0.47
Shank2Q80Z38 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shank2Q80Z38 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shank2Q80Z38 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC18.01■□□□□ 0.47
Shank2Q80Z38 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shank2Q80Z38 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Shank2Q80Z38 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC18■□□□□ 0.47
Shank2Q80Z38 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18■□□□□ 0.47
Shank2Q80Z38 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shank2Q80Z38 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms