Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpp38Q80UU2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rpp38Q80UU2 Gm22175-201ENSMUST00000175007 78 ntBASIC14.2□□□□□ -0.14
Rpp38Q80UU2 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.2□□□□□ -0.14
Rpp38Q80UU2 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.2□□□□□ -0.14
Rpp38Q80UU2 Gm6916-202ENSMUST00000205523 195 ntBASIC14.2□□□□□ -0.14
Rpp38Q80UU2 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpp38Q80UU2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpp38Q80UU2 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rpp38Q80UU2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rpp38Q80UU2 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpp38Q80UU2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpp38Q80UU2 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpp38Q80UU2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.2□□□□□ -0.14
Rpp38Q80UU2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpp38Q80UU2 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpp38Q80UU2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpp38Q80UU2 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rpp38Q80UU2 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rpp38Q80UU2 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpp38Q80UU2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpp38Q80UU2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Rpp38Q80UU2 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rpp38Q80UU2 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.2□□□□□ -0.14
Rpp38Q80UU2 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpp38Q80UU2 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Mir1897-201ENSMUST00000122581 272 ntBASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Gm27618-201ENSMUST00000183671 60 ntBASIC14.19□□□□□ -0.14
Rpp38Q80UU2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpp38Q80UU2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpp38Q80UU2 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpp38Q80UU2 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpp38Q80UU2 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpp38Q80UU2 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rpp38Q80UU2 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpp38Q80UU2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.17□□□□□ -0.14
Rpp38Q80UU2 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms