Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pif1Q80SX8 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pif1Q80SX8 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pif1Q80SX8 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pif1Q80SX8 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pif1Q80SX8 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pif1Q80SX8 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pif1Q80SX8 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pif1Q80SX8 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pif1Q80SX8 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pif1Q80SX8 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pif1Q80SX8 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pif1Q80SX8 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Pif1Q80SX8 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pif1Q80SX8 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.15□□□□□ -0.3
Pif1Q80SX8 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pif1Q80SX8 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pif1Q80SX8 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.15□□□□□ -0.3
Pif1Q80SX8 Gm10766-202ENSMUST00000194123 606 ntBASIC13.15□□□□□ -0.3
Pif1Q80SX8 AA619741-201ENSMUST00000195095 646 ntBASIC13.15□□□□□ -0.3
Pif1Q80SX8 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pif1Q80SX8 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pif1Q80SX8 Gm45668-201ENSMUST00000211271 493 ntBASIC13.15□□□□□ -0.3
Pif1Q80SX8 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pif1Q80SX8 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pif1Q80SX8 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pif1Q80SX8 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pif1Q80SX8 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pif1Q80SX8 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pif1Q80SX8 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pif1Q80SX8 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pif1Q80SX8 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pif1Q80SX8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pif1Q80SX8 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pif1Q80SX8 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pif1Q80SX8 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.14□□□□□ -0.31
Pif1Q80SX8 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Gm21854-201ENSMUST00000179901 471 ntBASIC13.14□□□□□ -0.31
Pif1Q80SX8 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.14□□□□□ -0.31
Pif1Q80SX8 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.14□□□□□ -0.31
Pif1Q80SX8 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pif1Q80SX8 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms