Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubfd1Q78JW9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Gm28760-201ENSMUST00000185995 736 ntBASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Gm28631-201ENSMUST00000190740 334 ntBASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Gm10766-202ENSMUST00000194123 606 ntBASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ubfd1Q78JW9 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ubfd1Q78JW9 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ubfd1Q78JW9 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ubfd1Q78JW9 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ubfd1Q78JW9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ubfd1Q78JW9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ubfd1Q78JW9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ubfd1Q78JW9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ubfd1Q78JW9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.83□□□□□ -0.19
Ubfd1Q78JW9 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ubfd1Q78JW9 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ubfd1Q78JW9 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Ubfd1Q78JW9 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ubfd1Q78JW9 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.83□□□□□ -0.2
Ubfd1Q78JW9 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.83□□□□□ -0.2
Ubfd1Q78JW9 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ubfd1Q78JW9 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ubfd1Q78JW9 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.83□□□□□ -0.2
Ubfd1Q78JW9 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ubfd1Q78JW9 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.83□□□□□ -0.2
Ubfd1Q78JW9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Ubfd1Q78JW9 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.83□□□□□ -0.2
Ubfd1Q78JW9 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ubfd1Q78JW9 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.83□□□□□ -0.2
Ubfd1Q78JW9 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ubfd1Q78JW9 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ubfd1Q78JW9 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Ubfd1Q78JW9 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.83□□□□□ -0.2
Ubfd1Q78JW9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ubfd1Q78JW9 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ubfd1Q78JW9 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ubfd1Q78JW9 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.83□□□□□ -0.2
Ubfd1Q78JW9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ubfd1Q78JW9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubfd1Q78JW9 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ubfd1Q78JW9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubfd1Q78JW9 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.82□□□□□ -0.2
Ubfd1Q78JW9 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ubfd1Q78JW9 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubfd1Q78JW9 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.82□□□□□ -0.2
Ubfd1Q78JW9 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubfd1Q78JW9 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ubfd1Q78JW9 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ubfd1Q78JW9 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.82□□□□□ -0.2
Ubfd1Q78JW9 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.82□□□□□ -0.2
Ubfd1Q78JW9 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.82□□□□□ -0.2
Ubfd1Q78JW9 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.82□□□□□ -0.2
Ubfd1Q78JW9 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.82□□□□□ -0.2
Ubfd1Q78JW9 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubfd1Q78JW9 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubfd1Q78JW9 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubfd1Q78JW9 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms