Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx55Q6ZPL9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.08■□□□□ 0.16
Ddx55Q6ZPL9 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.08■□□□□ 0.16
Ddx55Q6ZPL9 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC16.08■□□□□ 0.16
Ddx55Q6ZPL9 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx55Q6ZPL9 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC16.08■□□□□ 0.16
Ddx55Q6ZPL9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Ddx55Q6ZPL9 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.08■□□□□ 0.16
Ddx55Q6ZPL9 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx55Q6ZPL9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx55Q6ZPL9 Gm18222-201ENSMUST00000202416 1387 ntBASIC16.08■□□□□ 0.16
Ddx55Q6ZPL9 Ankra2-208ENSMUST00000226100 1476 ntBASIC16.08■□□□□ 0.16
Ddx55Q6ZPL9 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx55Q6ZPL9 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx55Q6ZPL9 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx55Q6ZPL9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx55Q6ZPL9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx55Q6ZPL9 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx55Q6ZPL9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx55Q6ZPL9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx55Q6ZPL9 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ddx55Q6ZPL9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Ddx55Q6ZPL9 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx55Q6ZPL9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx55Q6ZPL9 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx55Q6ZPL9 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC16.07■□□□□ 0.16
Ddx55Q6ZPL9 Gm11803-201ENSMUST00000119966 444 ntBASIC16.07■□□□□ 0.16
Ddx55Q6ZPL9 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC16.07■□□□□ 0.16
Ddx55Q6ZPL9 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx55Q6ZPL9 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC16.07■□□□□ 0.16
Ddx55Q6ZPL9 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ddx55Q6ZPL9 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx55Q6ZPL9 Gm5370-201ENSMUST00000187187 574 ntBASIC16.07■□□□□ 0.16
Ddx55Q6ZPL9 Gm8598-201ENSMUST00000221184 836 ntBASIC16.07■□□□□ 0.16
Ddx55Q6ZPL9 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC16.07■□□□□ 0.16
Ddx55Q6ZPL9 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.07■□□□□ 0.16
Ddx55Q6ZPL9 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx55Q6ZPL9 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx55Q6ZPL9 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx55Q6ZPL9 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Ddx55Q6ZPL9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx55Q6ZPL9 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Ddx55Q6ZPL9 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC16.07■□□□□ 0.16
Ddx55Q6ZPL9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx55Q6ZPL9 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.07■□□□□ 0.16
Ddx55Q6ZPL9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx55Q6ZPL9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 AC161252.3-201ENSMUST00000225465 1549 ntBASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 Gm5940-201ENSMUST00000117582 1068 ntBASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 Gm16177-201ENSMUST00000120728 718 ntBASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 Gm18473-201ENSMUST00000220543 868 ntBASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 Gm7399-201ENSMUST00000032395 858 ntBASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx55Q6ZPL9 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Gm22331-201ENSMUST00000158066 136 ntBASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Gm43818-201ENSMUST00000200605 466 ntBASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Gm18054-201ENSMUST00000207539 555 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms