Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Timd4Q6U7R4 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Timd4Q6U7R4 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Timd4Q6U7R4 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Timd4Q6U7R4 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.22□□□□□ -0.29
Timd4Q6U7R4 Gm15957-201ENSMUST00000118893 974 ntBASIC13.22□□□□□ -0.29
Timd4Q6U7R4 Gm12428-201ENSMUST00000119844 727 ntBASIC13.22□□□□□ -0.29
Timd4Q6U7R4 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Timd4Q6U7R4 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Timd4Q6U7R4 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Timd4Q6U7R4 Gm27533-201ENSMUST00000183800 152 ntBASIC13.22□□□□□ -0.29
Timd4Q6U7R4 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Timd4Q6U7R4 Gm45453-201ENSMUST00000211758 853 ntBASIC13.22□□□□□ -0.29
Timd4Q6U7R4 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.22□□□□□ -0.29
Timd4Q6U7R4 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Timd4Q6U7R4 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Timd4Q6U7R4 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Timd4Q6U7R4 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Timd4Q6U7R4 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Timd4Q6U7R4 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Timd4Q6U7R4 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Timd4Q6U7R4 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Timd4Q6U7R4 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.22□□□□□ -0.29
Timd4Q6U7R4 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Timd4Q6U7R4 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Timd4Q6U7R4 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.22□□□□□ -0.29
Timd4Q6U7R4 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Timd4Q6U7R4 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Timd4Q6U7R4 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Timd4Q6U7R4 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Timd4Q6U7R4 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Timd4Q6U7R4 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Timd4Q6U7R4 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Timd4Q6U7R4 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Timd4Q6U7R4 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Timd4Q6U7R4 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Timd4Q6U7R4 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Timd4Q6U7R4 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Timd4Q6U7R4 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Timd4Q6U7R4 Gm24543-201ENSMUST00000103867 82 ntBASIC13.21□□□□□ -0.29
Timd4Q6U7R4 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Timd4Q6U7R4 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Timd4Q6U7R4 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Timd4Q6U7R4 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Timd4Q6U7R4 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Timd4Q6U7R4 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Timd4Q6U7R4 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Timd4Q6U7R4 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Timd4Q6U7R4 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Timd4Q6U7R4 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Timd4Q6U7R4 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Timd4Q6U7R4 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.21□□□□□ -0.29
Timd4Q6U7R4 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Timd4Q6U7R4 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Timd4Q6U7R4 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Timd4Q6U7R4 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Timd4Q6U7R4 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Timd4Q6U7R4 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Timd4Q6U7R4 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Timd4Q6U7R4 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Timd4Q6U7R4 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Timd4Q6U7R4 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Timd4Q6U7R4 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Timd4Q6U7R4 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Timd4Q6U7R4 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Timd4Q6U7R4 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Timd4Q6U7R4 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.21□□□□□ -0.3
Timd4Q6U7R4 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Timd4Q6U7R4 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Timd4Q6U7R4 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Timd4Q6U7R4 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.2□□□□□ -0.3
Timd4Q6U7R4 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Timd4Q6U7R4 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Timd4Q6U7R4 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Timd4Q6U7R4 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Timd4Q6U7R4 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Timd4Q6U7R4 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.2□□□□□ -0.3
Timd4Q6U7R4 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Timd4Q6U7R4 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Timd4Q6U7R4 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Timd4Q6U7R4 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.2□□□□□ -0.3
Timd4Q6U7R4 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Timd4Q6U7R4 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.2□□□□□ -0.3
Timd4Q6U7R4 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Timd4Q6U7R4 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.2□□□□□ -0.3
Timd4Q6U7R4 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Timd4Q6U7R4 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Timd4Q6U7R4 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Timd4Q6U7R4 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.2□□□□□ -0.3
Timd4Q6U7R4 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.2□□□□□ -0.3
Timd4Q6U7R4 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Timd4Q6U7R4 Gm16476-201ENSMUST00000221544 139 ntBASIC13.2□□□□□ -0.3
Timd4Q6U7R4 Gm6888-201ENSMUST00000221983 706 ntBASIC13.2□□□□□ -0.3
Timd4Q6U7R4 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.2□□□□□ -0.3
Timd4Q6U7R4 Dupd1-202ENSMUST00000224735 548 ntBASIC13.2□□□□□ -0.3
Timd4Q6U7R4 Shd-206ENSMUST00000225145 998 ntBASIC13.2□□□□□ -0.3
Timd4Q6U7R4 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Timd4Q6U7R4 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Timd4Q6U7R4 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Timd4Q6U7R4 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms