Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Gm22331-201ENSMUST00000158066 136 ntBASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Gm5161-201ENSMUST00000075243 853 ntBASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Gm6091-201ENSMUST00000098307 165 ntBASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Gm9200-201ENSMUST00000118513 1354 ntBASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nup98Q6PFD9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Gm13886-201ENSMUST00000117876 1183 ntBASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nup98Q6PFD9 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nup98Q6PFD9 Ankra2-208ENSMUST00000226100 1476 ntBASIC16.47■□□□□ 0.23
Nup98Q6PFD9 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nup98Q6PFD9 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nup98Q6PFD9 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC16.47■□□□□ 0.23
Nup98Q6PFD9 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nup98Q6PFD9 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nup98Q6PFD9 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.47■□□□□ 0.23
Nup98Q6PFD9 Gm27486-201ENSMUST00000184923 80 ntBASIC16.47■□□□□ 0.23
Nup98Q6PFD9 Gm42929-201ENSMUST00000198374 1286 ntBASIC16.47■□□□□ 0.23
Nup98Q6PFD9 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Nup98Q6PFD9 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nup98Q6PFD9 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nup98Q6PFD9 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nup98Q6PFD9 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nup98Q6PFD9 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nup98Q6PFD9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nup98Q6PFD9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nup98Q6PFD9 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nup98Q6PFD9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nup98Q6PFD9 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Nup98Q6PFD9 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nup98Q6PFD9 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nup98Q6PFD9 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nup98Q6PFD9 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nup98Q6PFD9 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC16.47■□□□□ 0.23
Nup98Q6PFD9 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nup98Q6PFD9 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC16.47■□□□□ 0.23
Nup98Q6PFD9 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nup98Q6PFD9 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nup98Q6PFD9 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nup98Q6PFD9 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.47■□□□□ 0.23
Nup98Q6PFD9 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nup98Q6PFD9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nup98Q6PFD9 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Nup98Q6PFD9 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nup98Q6PFD9 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.46■□□□□ 0.23
Nup98Q6PFD9 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nup98Q6PFD9 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nup98Q6PFD9 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nup98Q6PFD9 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Nup98Q6PFD9 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nup98Q6PFD9 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nup98Q6PFD9 Gm12203-201ENSMUST00000118235 598 ntBASIC16.46■□□□□ 0.23
Nup98Q6PFD9 Gm12209-201ENSMUST00000120089 596 ntBASIC16.46■□□□□ 0.23
Nup98Q6PFD9 Gm44397-201ENSMUST00000195950 113 ntBASIC16.46■□□□□ 0.23
Nup98Q6PFD9 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nup98Q6PFD9 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nup98Q6PFD9 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nup98Q6PFD9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nup98Q6PFD9 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nup98Q6PFD9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.46■□□□□ 0.23
Nup98Q6PFD9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nup98Q6PFD9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms