Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Gm44608-201ENSMUST00000206827 855 ntBASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Snrnp40Q6PE01 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Snrnp40Q6PE01 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Snrnp40Q6PE01 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Snrnp40Q6PE01 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 BC037039-201ENSMUST00000192003 2205 ntBASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Gm29127-201ENSMUST00000188304 517 ntBASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snrnp40Q6PE01 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 Gm15376-201ENSMUST00000122258 783 ntBASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms