Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gm29424-201ENSMUST00000189716 696 ntBASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Gm28599-201ENSMUST00000189838 694 ntBASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Gm21867-201ENSMUST00000189917 696 ntBASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Gm29269-201ENSMUST00000190087 696 ntBASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Gm21722-201ENSMUST00000190153 696 ntBASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Gm28423-201ENSMUST00000190701 696 ntBASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Gm21899-201ENSMUST00000190745 696 ntBASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Gm21910-201ENSMUST00000191163 696 ntBASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Gm21849-201ENSMUST00000191571 696 ntBASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Gm28678-201ENSMUST00000191593 696 ntBASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Gm20910-201ENSMUST00000193268 696 ntBASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Gm21871-201ENSMUST00000194621 696 ntBASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb4Q6P8W9 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb4Q6P8W9 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb4Q6P8W9 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.91□□□□□ -0.02
Hmgb4Q6P8W9 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb4Q6P8W9 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb4Q6P8W9 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb4Q6P8W9 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb4Q6P8W9 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.91□□□□□ -0.02
Hmgb4Q6P8W9 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Hmgb4Q6P8W9 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb4Q6P8W9 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.91□□□□□ -0.02
Hmgb4Q6P8W9 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb4Q6P8W9 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb4Q6P8W9 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb4Q6P8W9 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb4Q6P8W9 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb4Q6P8W9 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb4Q6P8W9 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb4Q6P8W9 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb4Q6P8W9 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb4Q6P8W9 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb4Q6P8W9 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb4Q6P8W9 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb4Q6P8W9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb4Q6P8W9 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Hmgb4Q6P8W9 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgb4Q6P8W9 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Hmgb4Q6P8W9 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Gm6218-201ENSMUST00000219812 628 ntBASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms