Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ctr9Q62018 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ctr9Q62018 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.76■□□□□ 0.27
Ctr9Q62018 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ctr9Q62018 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Ctr9Q62018 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.76■□□□□ 0.27
Ctr9Q62018 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Ctr9Q62018 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Ctr9Q62018 Gm7730-201ENSMUST00000212486 454 ntBASIC16.76■□□□□ 0.27
Ctr9Q62018 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ctr9Q62018 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ctr9Q62018 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ctr9Q62018 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ctr9Q62018 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.76■□□□□ 0.27
Ctr9Q62018 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ctr9Q62018 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ctr9Q62018 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ctr9Q62018 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ctr9Q62018 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ctr9Q62018 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ctr9Q62018 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Ctr9Q62018 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Ctr9Q62018 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ctr9Q62018 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ctr9Q62018 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ctr9Q62018 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ctr9Q62018 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ctr9Q62018 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ctr9Q62018 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ctr9Q62018 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.75■□□□□ 0.27
Ctr9Q62018 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.75■□□□□ 0.27
Ctr9Q62018 Gm5866-201ENSMUST00000177881 973 ntBASIC16.75■□□□□ 0.27
Ctr9Q62018 Gm24694-201ENSMUST00000180054 110 ntBASIC16.75■□□□□ 0.27
Ctr9Q62018 Gm27663-201ENSMUST00000184839 110 ntBASIC16.75■□□□□ 0.27
Ctr9Q62018 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.75■□□□□ 0.27
Ctr9Q62018 Gm33320-201ENSMUST00000192232 530 ntBASIC16.75■□□□□ 0.27
Ctr9Q62018 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Ctr9Q62018 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.75■□□□□ 0.27
Ctr9Q62018 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.75■□□□□ 0.27
Ctr9Q62018 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.75■□□□□ 0.27
Ctr9Q62018 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ctr9Q62018 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ctr9Q62018 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ctr9Q62018 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ctr9Q62018 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ctr9Q62018 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ctr9Q62018 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ctr9Q62018 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ctr9Q62018 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ctr9Q62018 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ctr9Q62018 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ctr9Q62018 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ctr9Q62018 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ctr9Q62018 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ctr9Q62018 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ctr9Q62018 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ctr9Q62018 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ctr9Q62018 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ctr9Q62018 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ctr9Q62018 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ctr9Q62018 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.74■□□□□ 0.27
Ctr9Q62018 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ctr9Q62018 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ctr9Q62018 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.74■□□□□ 0.27
Ctr9Q62018 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ctr9Q62018 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ctr9Q62018 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ctr9Q62018 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ctr9Q62018 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ctr9Q62018 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ctr9Q62018 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ctr9Q62018 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ctr9Q62018 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ctr9Q62018 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ctr9Q62018 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ctr9Q62018 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ctr9Q62018 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ctr9Q62018 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ctr9Q62018 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ctr9Q62018 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ctr9Q62018 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.73■□□□□ 0.27
Ctr9Q62018 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ctr9Q62018 Gm15460-201ENSMUST00000118147 391 ntBASIC16.73■□□□□ 0.27
Ctr9Q62018 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
Ctr9Q62018 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.73■□□□□ 0.27
Ctr9Q62018 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ctr9Q62018 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ctr9Q62018 Gm44855-201ENSMUST00000205725 362 ntBASIC16.73■□□□□ 0.27
Ctr9Q62018 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ctr9Q62018 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.73■□□□□ 0.27
Ctr9Q62018 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ctr9Q62018 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ctr9Q62018 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ctr9Q62018 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ctr9Q62018 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Ctr9Q62018 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ctr9Q62018 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.73■□□□□ 0.27
Ctr9Q62018 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ctr9Q62018 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ctr9Q62018 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms