Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gli3Q61602 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC18.75■□□□□ 0.59
Gli3Q61602 Gm11667-201ENSMUST00000119828 486 ntBASIC18.75■□□□□ 0.59
Gli3Q61602 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC18.75■□□□□ 0.59
Gli3Q61602 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Gli3Q61602 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC18.75■□□□□ 0.59
Gli3Q61602 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC18.75■□□□□ 0.59
Gli3Q61602 Gm8385-201ENSMUST00000058999 643 ntBASIC18.75■□□□□ 0.59
Gli3Q61602 Gm16372-201ENSMUST00000073088 450 ntBASIC18.75■□□□□ 0.59
Gli3Q61602 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gli3Q61602 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC18.75■□□□□ 0.59
Gli3Q61602 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gli3Q61602 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gli3Q61602 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gli3Q61602 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gli3Q61602 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gli3Q61602 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Gli3Q61602 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Gli3Q61602 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gli3Q61602 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gli3Q61602 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gli3Q61602 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Gli3Q61602 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gli3Q61602 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gli3Q61602 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gli3Q61602 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Gli3Q61602 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Gli3Q61602 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC18.74■□□□□ 0.59
Gli3Q61602 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gli3Q61602 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Gli3Q61602 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC18.74■□□□□ 0.59
Gli3Q61602 Gm10752-201ENSMUST00000218348 729 ntBASIC18.74■□□□□ 0.59
Gli3Q61602 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gli3Q61602 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gli3Q61602 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gli3Q61602 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gli3Q61602 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gli3Q61602 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gli3Q61602 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Gli3Q61602 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gli3Q61602 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gli3Q61602 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gli3Q61602 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gli3Q61602 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gli3Q61602 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gli3Q61602 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gli3Q61602 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gli3Q61602 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gli3Q61602 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC18.73■□□□□ 0.59
Gli3Q61602 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gli3Q61602 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC18.73■□□□□ 0.59
Gli3Q61602 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Gli3Q61602 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gli3Q61602 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gli3Q61602 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gli3Q61602 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gli3Q61602 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gli3Q61602 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gli3Q61602 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gli3Q61602 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gli3Q61602 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gli3Q61602 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gli3Q61602 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Gli3Q61602 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gli3Q61602 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gli3Q61602 Gm44262-201ENSMUST00000204969 372 ntBASIC18.72■□□□□ 0.59
Gli3Q61602 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gli3Q61602 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gli3Q61602 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gli3Q61602 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Gli3Q61602 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gli3Q61602 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gli3Q61602 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gli3Q61602 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gli3Q61602 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gli3Q61602 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Gli3Q61602 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gli3Q61602 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gli3Q61602 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gli3Q61602 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gli3Q61602 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gli3Q61602 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Gli3Q61602 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC18.72■□□□□ 0.59
Gli3Q61602 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Gli3Q61602 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC18.72■□□□□ 0.59
Gli3Q61602 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gli3Q61602 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Gli3Q61602 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Gli3Q61602 Gm9211-201ENSMUST00000182882 975 ntBASIC18.72■□□□□ 0.59
Gli3Q61602 Gm29741-201ENSMUST00000192667 421 ntBASIC18.72■□□□□ 0.59
Gli3Q61602 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Gli3Q61602 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Gli3Q61602 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gli3Q61602 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Gli3Q61602 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gli3Q61602 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC18.71■□□□□ 0.59
Gli3Q61602 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gli3Q61602 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Gli3Q61602 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gli3Q61602 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms