Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC10.55□□□□□ -0.72
Foxc1Q61572 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Foxc1Q61572 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Foxc1Q61572 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Foxc1Q61572 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC10.55□□□□□ -0.72
Foxc1Q61572 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC10.55□□□□□ -0.72
Foxc1Q61572 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC10.55□□□□□ -0.72
Foxc1Q61572 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Gm18737-201ENSMUST00000173594 937 ntBASIC10.55□□□□□ -0.72
Foxc1Q61572 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Foxc1Q61572 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC10.55□□□□□ -0.72
Foxc1Q61572 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC10.55□□□□□ -0.72
Foxc1Q61572 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.55□□□□□ -0.72
Foxc1Q61572 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC10.55□□□□□ -0.72
Foxc1Q61572 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Foxc1Q61572 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Gm13233-201ENSMUST00000118760 1443 ntBASIC10.55□□□□□ -0.72
Foxc1Q61572 Gm13244-201ENSMUST00000118855 1446 ntBASIC10.55□□□□□ -0.72
Foxc1Q61572 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC10.55□□□□□ -0.72
Foxc1Q61572 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Gm45003-201ENSMUST00000205875 2158 ntBASIC10.55□□□□□ -0.72
Foxc1Q61572 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Foxc1Q61572 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Foxc1Q61572 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC10.54□□□□□ -0.72
Foxc1Q61572 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Foxc1Q61572 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Foxc1Q61572 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Foxc1Q61572 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Gm11543-201ENSMUST00000120758 370 ntBASIC10.54□□□□□ -0.72
Foxc1Q61572 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Gm12017-201ENSMUST00000122453 1003 ntBASIC10.54□□□□□ -0.72
Foxc1Q61572 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC10.54□□□□□ -0.72
Foxc1Q61572 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Ap1g1-206ENSMUST00000179104 1096 ntBASIC10.54□□□□□ -0.72
Foxc1Q61572 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC10.54□□□□□ -0.72
Foxc1Q61572 Gm5708-201ENSMUST00000196289 886 ntBASIC10.54□□□□□ -0.72
Foxc1Q61572 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC10.54□□□□□ -0.72
Foxc1Q61572 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC10.54□□□□□ -0.72
Foxc1Q61572 Prl7a1-203ENSMUST00000224852 1283 ntBASIC10.54□□□□□ -0.72
Foxc1Q61572 Ntrk2-209ENSMUST00000225950 2640 ntBASIC10.54□□□□□ -0.72
Foxc1Q61572 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC10.54□□□□□ -0.72
Foxc1Q61572 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Foxc1Q61572 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC10.54□□□□□ -0.72
Foxc1Q61572 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC10.54□□□□□ -0.72
Foxc1Q61572 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Foxc1Q61572 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Foxc1Q61572 Gm37728-201ENSMUST00000195025 2292 ntBASIC10.54□□□□□ -0.72
Foxc1Q61572 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Foxc1Q61572 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms