Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Gm8584-201ENSMUST00000171982 758 ntBASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.35□□□□□ -0.27
Trim40Q3UWA4 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Gm13418-201ENSMUST00000119097 944 ntBASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.34□□□□□ -0.27
Trim40Q3UWA4 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim40Q3UWA4 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
Trim40Q3UWA4 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trim40Q3UWA4 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.33□□□□□ -0.27
Trim40Q3UWA4 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim40Q3UWA4 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim40Q3UWA4 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim40Q3UWA4 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim40Q3UWA4 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim40Q3UWA4 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim40Q3UWA4 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim40Q3UWA4 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trim40Q3UWA4 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.33□□□□□ -0.28
Trim40Q3UWA4 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim40Q3UWA4 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim40Q3UWA4 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.33□□□□□ -0.28
Trim40Q3UWA4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.33□□□□□ -0.28
Trim40Q3UWA4 Gm37153-201ENSMUST00000193637 231 ntBASIC13.33□□□□□ -0.28
Trim40Q3UWA4 Gm6089-201ENSMUST00000197666 938 ntBASIC13.33□□□□□ -0.28
Trim40Q3UWA4 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.33□□□□□ -0.28
Trim40Q3UWA4 Gm7787-201ENSMUST00000216858 688 ntBASIC13.33□□□□□ -0.28
Trim40Q3UWA4 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim40Q3UWA4 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim40Q3UWA4 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trim40Q3UWA4 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim40Q3UWA4 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trim40Q3UWA4 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim40Q3UWA4 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trim40Q3UWA4 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim40Q3UWA4 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim40Q3UWA4 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim40Q3UWA4 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim40Q3UWA4 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim40Q3UWA4 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim40Q3UWA4 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim40Q3UWA4 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim40Q3UWA4 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim40Q3UWA4 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim40Q3UWA4 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim40Q3UWA4 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.32□□□□□ -0.28
Trim40Q3UWA4 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms