Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf44Q3UHJ8 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Rnf44Q3UHJ8 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Rnf44Q3UHJ8 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf44Q3UHJ8 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Rnf44Q3UHJ8 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf44Q3UHJ8 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf44Q3UHJ8 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf44Q3UHJ8 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.71□□□□□ -0.21
Rnf44Q3UHJ8 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Rnf44Q3UHJ8 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf44Q3UHJ8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf44Q3UHJ8 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf44Q3UHJ8 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf44Q3UHJ8 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf44Q3UHJ8 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf44Q3UHJ8 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf44Q3UHJ8 Gm15957-201ENSMUST00000118893 974 ntBASIC13.71□□□□□ -0.21
Rnf44Q3UHJ8 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf44Q3UHJ8 Gm27680-201ENSMUST00000184192 160 ntBASIC13.71□□□□□ -0.21
Rnf44Q3UHJ8 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf44Q3UHJ8 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.71□□□□□ -0.21
Rnf44Q3UHJ8 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.71□□□□□ -0.21
Rnf44Q3UHJ8 Gm6888-201ENSMUST00000221983 706 ntBASIC13.71□□□□□ -0.21
Rnf44Q3UHJ8 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf44Q3UHJ8 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf44Q3UHJ8 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf44Q3UHJ8 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf44Q3UHJ8 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf44Q3UHJ8 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf44Q3UHJ8 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Rnf44Q3UHJ8 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf44Q3UHJ8 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf44Q3UHJ8 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf44Q3UHJ8 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf44Q3UHJ8 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Rnf44Q3UHJ8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf44Q3UHJ8 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf44Q3UHJ8 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.71□□□□□ -0.22
Rnf44Q3UHJ8 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf44Q3UHJ8 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.71□□□□□ -0.22
Rnf44Q3UHJ8 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf44Q3UHJ8 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf44Q3UHJ8 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf44Q3UHJ8 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf44Q3UHJ8 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.22
Rnf44Q3UHJ8 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf44Q3UHJ8 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf44Q3UHJ8 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Rnf44Q3UHJ8 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf44Q3UHJ8 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf44Q3UHJ8 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rnf44Q3UHJ8 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf44Q3UHJ8 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf44Q3UHJ8 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf44Q3UHJ8 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rnf44Q3UHJ8 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Rnf44Q3UHJ8 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf44Q3UHJ8 Gm13453-201ENSMUST00000118708 357 ntBASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms