Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Crnkl1P63154 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Crnkl1P63154 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Crnkl1P63154 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Crnkl1P63154 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Crnkl1P63154 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Crnkl1P63154 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Crnkl1P63154 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Crnkl1P63154 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Crnkl1P63154 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Crnkl1P63154 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Crnkl1P63154 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Crnkl1P63154 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Crnkl1P63154 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Crnkl1P63154 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Crnkl1P63154 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Crnkl1P63154 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Crnkl1P63154 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Crnkl1P63154 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Crnkl1P63154 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Crnkl1P63154 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Crnkl1P63154 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Crnkl1P63154 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Crnkl1P63154 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Crnkl1P63154 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Crnkl1P63154 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.08□□□□□ -0.16
Crnkl1P63154 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.08□□□□□ -0.16
Crnkl1P63154 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Crnkl1P63154 Gm7230-201ENSMUST00000173026 815 ntBASIC14.08□□□□□ -0.16
Crnkl1P63154 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Crnkl1P63154 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Crnkl1P63154 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Crnkl1P63154 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Crnkl1P63154 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Crnkl1P63154 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Crnkl1P63154 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Crnkl1P63154 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Crnkl1P63154 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.08□□□□□ -0.16
Crnkl1P63154 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Crnkl1P63154 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Crnkl1P63154 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Crnkl1P63154 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Crnkl1P63154 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Crnkl1P63154 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Crnkl1P63154 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Crnkl1P63154 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Crnkl1P63154 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Crnkl1P63154 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Crnkl1P63154 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Crnkl1P63154 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Crnkl1P63154 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Crnkl1P63154 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.08□□□□□ -0.16
Crnkl1P63154 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Crnkl1P63154 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Crnkl1P63154 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Crnkl1P63154 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Crnkl1P63154 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Crnkl1P63154 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.07□□□□□ -0.16
Crnkl1P63154 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Crnkl1P63154 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Crnkl1P63154 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Crnkl1P63154 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Crnkl1P63154 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Crnkl1P63154 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Crnkl1P63154 Gm8318-201ENSMUST00000182954 872 ntBASIC14.07□□□□□ -0.16
Crnkl1P63154 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.07□□□□□ -0.16
Crnkl1P63154 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.07□□□□□ -0.16
Crnkl1P63154 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Crnkl1P63154 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Crnkl1P63154 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Crnkl1P63154 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Crnkl1P63154 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.07□□□□□ -0.16
Crnkl1P63154 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Crnkl1P63154 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Crnkl1P63154 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Crnkl1P63154 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.07□□□□□ -0.16
Crnkl1P63154 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.07□□□□□ -0.16
Crnkl1P63154 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Crnkl1P63154 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Crnkl1P63154 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.07□□□□□ -0.16
Crnkl1P63154 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Crnkl1P63154 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Crnkl1P63154 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.07□□□□□ -0.16
Crnkl1P63154 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Crnkl1P63154 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.07□□□□□ -0.16
Crnkl1P63154 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Crnkl1P63154 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.06□□□□□ -0.16
Crnkl1P63154 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Crnkl1P63154 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.06□□□□□ -0.16
Crnkl1P63154 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Crnkl1P63154 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Crnkl1P63154 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Crnkl1P63154 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Crnkl1P63154 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Crnkl1P63154 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Crnkl1P63154 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Crnkl1P63154 Gm7222-201ENSMUST00000117512 906 ntBASIC14.06□□□□□ -0.16
Crnkl1P63154 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Crnkl1P63154 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.06□□□□□ -0.16
Crnkl1P63154 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms