Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vbp1P61759 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.89□□□□□ -0.35
Vbp1P61759 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.89□□□□□ -0.35
Vbp1P61759 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vbp1P61759 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Vbp1P61759 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vbp1P61759 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vbp1P61759 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.89□□□□□ -0.35
Vbp1P61759 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vbp1P61759 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.89□□□□□ -0.35
Vbp1P61759 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Vbp1P61759 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vbp1P61759 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Vbp1P61759 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.88□□□□□ -0.35
Vbp1P61759 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vbp1P61759 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vbp1P61759 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vbp1P61759 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Vbp1P61759 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vbp1P61759 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vbp1P61759 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Vbp1P61759 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vbp1P61759 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vbp1P61759 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vbp1P61759 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vbp1P61759 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vbp1P61759 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.88□□□□□ -0.35
Vbp1P61759 Gm12497-201ENSMUST00000138778 237 ntBASIC12.88□□□□□ -0.35
Vbp1P61759 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.88□□□□□ -0.35
Vbp1P61759 Rprl3-201ENSMUST00000157400 290 ntBASIC12.88□□□□□ -0.35
Vbp1P61759 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vbp1P61759 Gm8520-201ENSMUST00000186517 868 ntBASIC12.88□□□□□ -0.35
Vbp1P61759 Gm37055-201ENSMUST00000191866 133 ntBASIC12.88□□□□□ -0.35
Vbp1P61759 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.88□□□□□ -0.35
Vbp1P61759 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vbp1P61759 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vbp1P61759 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vbp1P61759 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.88□□□□□ -0.35
Vbp1P61759 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.88□□□□□ -0.35
Vbp1P61759 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vbp1P61759 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vbp1P61759 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vbp1P61759 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Vbp1P61759 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vbp1P61759 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vbp1P61759 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.88□□□□□ -0.35
Vbp1P61759 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vbp1P61759 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vbp1P61759 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vbp1P61759 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vbp1P61759 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vbp1P61759 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vbp1P61759 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vbp1P61759 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Vbp1P61759 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.87□□□□□ -0.35
Vbp1P61759 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vbp1P61759 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vbp1P61759 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vbp1P61759 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.87□□□□□ -0.35
Vbp1P61759 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vbp1P61759 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vbp1P61759 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vbp1P61759 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Vbp1P61759 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vbp1P61759 Gm15794-201ENSMUST00000120182 631 ntBASIC12.87□□□□□ -0.35
Vbp1P61759 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Vbp1P61759 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vbp1P61759 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.87□□□□□ -0.35
Vbp1P61759 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.87□□□□□ -0.35
Vbp1P61759 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vbp1P61759 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.87□□□□□ -0.35
Vbp1P61759 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vbp1P61759 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vbp1P61759 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vbp1P61759 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vbp1P61759 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vbp1P61759 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vbp1P61759 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vbp1P61759 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vbp1P61759 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vbp1P61759 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vbp1P61759 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vbp1P61759 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vbp1P61759 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vbp1P61759 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vbp1P61759 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vbp1P61759 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vbp1P61759 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vbp1P61759 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Vbp1P61759 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vbp1P61759 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vbp1P61759 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Vbp1P61759 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vbp1P61759 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Vbp1P61759 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vbp1P61759 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vbp1P61759 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.86□□□□□ -0.35
Vbp1P61759 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vbp1P61759 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Vbp1P61759 Gm14042-201ENSMUST00000120139 833 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms